RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 GRAMD1BQ3KR37 738 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 IL23RQ5VWK5 629 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 CDH24Q86UP0 819 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 OR4C3Q8NH37 302 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 GOT1L1Q8NHS2 421 aaPredicted RBP17.54■□□□□ 0.4
USP40-207ENST00000450940 FAM120BQ96EK7 910 aaKnown RBP17.54■□□□□ 0.4
USP40-207ENST00000450940 C1GALT1C1Q96EU7 318 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 TBL1XR1Q9BZK7 514 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 PTGES2Q9H7Z7 377 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 HHATLQ9HCP6 504 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 GIN1Q9NXP7 522 aa17.54■□□□□ 0.4
USP40-207ENST00000450940 A0A1W2PRB8 838 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 TM9SF1O15321 606 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 ITM2AO43736 263 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 SKAP2O75563 359 aaPredicted RBP17.53■□□□□ 0.4
USP40-207ENST00000450940 KCNK2O95069 426 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 ANGPTL1O95841 491 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 SERPINE1P05121 402 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 HK1P19367 917 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 EFNA1P20827 205 aaPredicted RBP17.53■□□□□ 0.4
USP40-207ENST00000450940 PRPS1L1P21108 318 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 TBXA2RP21731 343 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 DGKQP52824 942 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 CLDN15P56746 228 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 EEF1A1P68104 462 aaKnown RBP17.53■□□□□ 0.4
USP40-207ENST00000450940 EMX2Q04743 252 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 FOXF2Q12947 444 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 DUSP5Q16690 384 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 TMEM44Q2T9K0 475 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 CPTPQ5TA50 214 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 EEF1A1P5Q5VTE0 462 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 FNDC5Q8NAU1 212 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 OR5P2Q8WZ92 322 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 SLC9A6Q92581 669 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 C16orf58Q96GQ5 468 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 PKNOX2Q96KN3 472 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 C1orf50Q9BV19 199 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 SFXN3Q9BWM7 321 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 ACBD3Q9H3P7 528 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 ATAD3AQ9NVI7 634 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 ASIC5Q9NY37 505 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.53■□□□□ 0.4
USP40-207ENST00000450940 ZNF337Q9Y3M9 751 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 ACTL7BQ9Y614 415 aa17.53■□□□□ 0.4
USP40-207ENST00000450940 HRNRQ86YZ3 2850 aaPredicted RBP17.53■□□□□ 0.4
USP40-207ENST00000450940 CTAG2O75638 210 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 SNUPNO95149 360 aaKnown RBP17.52■□□□□ 0.4
USP40-207ENST00000450940 HSPA4LO95757 839 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 ALOX5P09917 674 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 RFX3P48380 749 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 AGFG1P52594 562 aaKnown RBP17.52■□□□□ 0.4
USP40-207ENST00000450940 STX5Q13190 355 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 MPP2Q14168 576 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 TESK1Q15569 626 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 FAM222BQ8WU58 562 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 TUBGCP3Q96CW5 907 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 STACQ99469 402 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 PRPF18Q99633 342 aaKnown RBP17.52■□□□□ 0.4
USP40-207ENST00000450940 ZNF395Q9H8N7 513 aaPredicted RBP17.52■□□□□ 0.4
USP40-207ENST00000450940 DUSP22Q9NRW4 184 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 ZCCHC3Q9NUD5 404 aaKnown RBP17.52■□□□□ 0.4
USP40-207ENST00000450940 CRIM1Q9NZV1 1036 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 HAO1Q9UJM8 370 aa17.52■□□□□ 0.4
USP40-207ENST00000450940 OR2M5A3KFT3 312 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 SOX30O94993 753 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 ZWINTO95229 277 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 OXSR1O95747 527 aaPredicted RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 TGM6O95932 706 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 HMGN2P05204 90 aaKnown RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 CRHP06850 196 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 PRIM2P49643 509 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 ABCE1P61221 599 aaKnown RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 SORDQ00796 357 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 OCRLQ01968 901 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 MAD2L1Q13257 205 aaPredicted RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 SNTB1Q13884 538 aaKnown RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 DAZAP2Q15038 168 aaPredicted RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 CHI3L2Q15782 390 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 LSM12Q3MHD2 195 aaKnown RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 FLYWCH1Q4VC44 716 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 CAMKMTQ7Z624 323 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 ZAR1Q86SH2 424 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 CROCCP2Q86T23 111 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 KIF18BQ86Y91 864 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 KRTCAP2Q8N6L1 136 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 PPP1R14CQ8TAE6 165 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 NUDT8Q8WV74 236 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 PGM2Q96G03 612 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 PIGQQ9BRB3 760 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 BTBD2Q9BX70 525 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 C20orf27Q9GZN8 174 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 PIGUQ9H490 435 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 UBQLN4Q9NRR5 601 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 FBXO34Q9NWN3 711 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 EIF3LQ9Y262 564 aaKnown RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 RAP2CQ9Y3L5 183 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 HIVEP1P15822 2718 aa17.51■□□□□ 0.39
USP40-207ENST00000450940 TEP1Q99973 2627 aaKnown RBP17.51■□□□□ 0.39
USP40-207ENST00000450940 WDR91A4D1P6 747 aa17.5■□□□□ 0.39
USP40-207ENST00000450940 ESPNB1AK53 854 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms