RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 OGFOD2Q6N063 350 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 CDC73Q6P1J9 531 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 COX18Q8N8Q8 333 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 TNIP2Q8NFZ5 429 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 OR56A1Q8NGH5 318 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 SFXN5Q8TD22 340 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 ZNF75CPQ92670 426 aaPredicted RBP11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 CDS1Q92903 461 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 CHMP6Q96FZ7 201 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 ATP6V1G3Q96LB4 118 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 STACQ99469 402 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 TBL1XR1Q9BZK7 514 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 ENKD1Q9H0I2 346 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 NEUROD4Q9HD90 331 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 DUSP22Q9NRW4 184 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 GIN1Q9NXP7 522 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 DKKL1Q9UK85 242 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 RPH3AQ9Y2J0 694 aaPredicted RBP11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 KCNE3Q9Y6H6 103 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 DOCK7Q96N67 2140 aa11.56□□□□□ -0.56
PRPF40A-203ENST00000448428 GOLGA8QA0A0J9YX86 632 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 PRSS51A0A1B0GVH4 220 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 GOLGA8OA6NCC3 632 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 CD8B2A6NJW9 211 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 TRPC5OSA6NMA1 111 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 ALG1L2C9J202 215 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 GOLGA8NF8WBI6 632 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 RNASET2O00584 256 aaKnown RBP11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 OXSR1O95747 527 aaPredicted RBP11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 ANGPTL1O95841 491 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 NGFRP08138 427 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 COX6B1P14854 86 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 CHMP24386 653 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 CEACAM8P31997 349 aaPredicted RBP11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 UFM1P61960 85 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 SRYQ05066 204 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 TFF3Q07654 80 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 SF3B4Q15427 424 aaKnown RBP eCLIP11.55□□□□□ -0.562e-14■■■■■ 48
PRPF40A-203ENST00000448428 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 NSUN5P2Q63ZY6 315 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 CRYBG3Q68DQ2 2970 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 ENPP6Q6UWR7 440 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 SPATA19Q7Z5L4 167 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 LACC1Q8IV20 430 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 MCEMP1Q8IX19 187 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 CLEC4FQ8N1N0 589 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 ACBD4Q8NC06 268 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 OR5AK3PQ8NH89 298 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 ZPLD1Q8TCW7 415 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 ADAMTS15Q8TE58 950 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 TESCQ96BS2 214 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 MOAP1Q96BY2 351 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 DTNBP1Q96EV8 351 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 TEX37Q96LM6 180 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 SFXN2Q96NB2 322 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 TRIB1Q96RU8 372 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 SPOCK3Q9BQ16 436 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 RUBCNLQ9H714 662 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 PTGES2Q9H7Z7 377 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 UBQLN4Q9NRR5 601 aa11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 FAF1Q9UNN5 650 aaPredicted RBP11.55□□□□□ -0.56
PRPF40A-203ENST00000448428 IGLV3-32A0A0A0MS00 114 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 HSPB2A8KAH6 182 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 FAM47E-STBD1D6RA91 191 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 SLCO1B7G3V0H7 640 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 ZNF195O14628 629 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 KLF11O14901 512 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 NDUFB5O43674 189 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 GMFGO60234 142 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 CPSF4O95639 269 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 H2AFXP16104 143 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 HK1P19367 917 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 LCN1P31025 176 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 SOAT1P35610 550 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 TIMP3P35625 211 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 LHX2P50458 406 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 NME5P56597 212 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 CLDN18P56856 261 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 HSPB2Q16082 182 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 TTMPQ5BVD1 217 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 SPANXN4Q5MJ08 99 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 ANXA8L1Q5VT79 327 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 AAGABQ6PD74 315 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 HDXQ7Z353 690 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 MAVSQ7Z434 540 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 C6orf120Q7Z4R8 191 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 ANKRD46Q86W74 232 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 ZNF295-AS1Q8N0V1 137 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 NAXEQ8NCW5 288 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 OR7D2Q96RA2 312 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 TUBA1CQ9BQE3 449 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 G6PC3Q9BUM1 346 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 CALHM2Q9HA72 323 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 AIG1Q9NVV5 245 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 PCDHGB4Q9UN71 923 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 GPR45Q9Y5Y3 372 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 PKDREJQ9NTG1 2253 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 MED12LQ86YW9 2145 aa11.54□□□□□ -0.56
PRPF40A-203ENST00000448428 INTS1Q8N201 2190 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms