RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PTCHD1Q96NR3 888 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 TAPBPLQ9BX59 468 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 HEBP2Q9Y5Z4 205 aa13.79□□□□□ -0.2
SF1-211ENST00000448404 ARRDC5A6NEK1 342 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 SDC3O75056 442 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 THEGLP0DJG4 465 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
SF1-211ENST00000448404 SNRPGP62308 76 aaKnown RBP13.78□□□□□ -0.2
SF1-211ENST00000448404 RPS25P62851 125 aaKnown RBP13.78□□□□□ -0.2
SF1-211ENST00000448404 SUZ12Q15022 739 aaKnown RBP13.78□□□□□ -0.2
SF1-211ENST00000448404 SMUG1Q53HV7 270 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 PARGQ86W56 976 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 NATD1Q8N6N6 113 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 POC5Q8NA72 575 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 SRFBP1Q8NEF9 429 aaKnown RBP13.78□□□□□ -0.2
SF1-211ENST00000448404 TM4SF19Q96DZ7 209 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 HCAR1Q9BXC0 346 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 NUAK2Q9H093 628 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 USP36Q9P275 1121 aaKnown RBP13.78□□□□□ -0.2
SF1-211ENST00000448404 SLC22A7Q9Y694 548 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 SPAG17Q6Q759 2223 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 MYL12BO14950 172 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 MYF5P13349 255 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 TGM1P22735 817 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 SSTR4P31391 388 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 CSTF2P33240 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
SF1-211ENST00000448404 GABRA3P34903 492 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 CRYBB2P43320 205 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 NR4A2P43354 598 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 LIMK1P53667 647 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 CDK5Q00535 292 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 MRPL2Q5T653 305 aaKnown RBP13.78□□□□□ -0.2
SF1-211ENST00000448404 CSNK1A1LQ8N752 337 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 TEX47Q8TBZ9 253 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 SFXN5Q8TD22 340 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
SF1-211ENST00000448404 SARGQ9BW04 601 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 CLCA3PQ9Y6N3 262 aa13.78□□□□□ -0.2
SF1-211ENST00000448404 SH3D21A4FU49 640 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 TGFBR3LH3BV60 316 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 AP3D1O14617 1153 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 FOXL2P58012 376 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 CAMK2BQ13554 666 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 GXYLT1Q4G148 440 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 LYSMD2Q8IV50 215 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 LAX1Q8IWV1 398 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 PHC2Q8IXK0 858 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 UBE2J2Q8N2K1 259 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 RERGQ96A58 199 aaPredicted RBP13.77□□□□□ -0.2
SF1-211ENST00000448404 EFHD2Q96C19 240 aaPredicted RBP13.77□□□□□ -0.2
SF1-211ENST00000448404 MS4A4EQ96PG1 132 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 CNOT2Q9NZN8 540 aaKnown RBP13.77□□□□□ -0.2
SF1-211ENST00000448404 FBXL4Q9UKA2 621 aa13.77□□□□□ -0.2
SF1-211ENST00000448404 LRRN3E7EW58 273 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 NCR1O76036 304 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 UBXN7O94888 489 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 SMIM10L1P0DMW3 83 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 CLUP10909 449 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 AKT2P31751 481 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 ZNF136P52737 540 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 GAS1P54826 345 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 BTG2P78543 158 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 DUSP8Q13202 625 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 PRAMEF17Q5VTA0 474 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 AGAP7PQ5VUJ5 663 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 SLC27A4Q6P1M0 643 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 NANOGP1Q8N7R0 232 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 DTX3Q8N9I9 347 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 SMRP1Q8NCR6 262 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 ANKK1Q8NFD2 765 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 CLIP3Q96DZ5 547 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 SMIM10Q96HG1 83 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 MSLNLQ96KJ4 702 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 ARHGDIGQ99819 225 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 CCDC3Q9BQI4 270 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 LRRN3Q9H3W5 708 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 MAT2BQ9NZL9 334 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 RPL36Q9Y3U8 105 aaKnown RBP13.77□□□□□ -0.21
SF1-211ENST00000448404 UNC13CQ8NB66 2214 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 SLC9B1P1A6NJY1 282 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 GMFGO60234 142 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 RFPL3O75679 317 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 APBB3O95704 486 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 GYPBP06028 91 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 MAKP20794 623 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 HHEXQ03014 270 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 CCINQ13939 588 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 FZD2Q14332 565 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 KIR2DS3Q14952 304 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 TRAM2Q15035 370 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 ZNF628Q5EBL2 1059 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 OR2L13Q8N349 312 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 COX18Q8N8Q8 333 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 OR51A7Q8NH64 312 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 FGF11Q92914 225 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 TP53INP1Q96A56 240 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 ZNF764Q96H86 408 aaPredicted RBP13.77□□□□□ -0.21
SF1-211ENST00000448404 PEX11GQ96HA9 241 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 LMF1Q96S06 567 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 SERINC2Q96SA4 455 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 244.4 ms