RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ATMQ13315 3056 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 NCKAP5O14513 1909 aa16.51■□□□□ 0.23
TRAPPC4-203ENST00000447216 A0A0G2JPF8 293 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 HNRNPCL2B2RXH8 293 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 HNRNPCL3B7ZW38 293 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 NPIPB9F8W1W9 429 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 CXCR6O00574 342 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 TP53I11O14683 189 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 NEURL1O76050 574 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 HNRNPCL4P0DMR1 293 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 ME2P23368 584 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 HTR1EP28566 365 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 ATP12AP54707 1039 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 KCNAB2Q13303 367 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 MAPK14Q16539 360 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 PDZK1Q5T2W1 519 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 PRAMEF20Q5VT98 475 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 PRAMEF8Q5VWM4 474 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 PRAMEF7Q5VXH5 474 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 APOOLQ6UXV4 268 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 DND1Q8IYX4 353 aaKnown RBP16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 ARHGAP24Q8N264 748 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF614Q8N883 585 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 GATSQ8NAP1 163 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 MDS2Q8NDY4 140 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 GRHL3Q8TE85 626 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 FIG4Q92562 907 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 TTC9Q92623 222 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 HAS2Q92819 552 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 MCUR1Q96AQ8 359 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 CCDC124Q96CT7 223 aaKnown RBP16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 TRIM45Q9H8W5 580 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 BCL2L10Q9HD36 194 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 SH2D2AQ9NP31 389 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 CNOT11Q9UKZ1 510 aaKnown RBP16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF451Q9Y4E5 1061 aa16.5■□□□□ 0.23
TRAPPC4-203ENST00000447216 DSPPQ9NZW4 1301 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 C2orf72A6NCS6 295 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 PRAMEF25A6NGN4 478 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 C17orf51A8MQB3 221 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 SCO2O43819 266 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 FADS1O60427 444 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 UGT2B17O75795 530 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 OPN1SWP03999 348 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 LCN1P31025 176 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 EVI2BP34910 448 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 PCBP3P57721 371 aaKnown RBP16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 CACNA1BQ00975 2339 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 VEZF1Q14119 521 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 SLC22A10Q63ZE4 541 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 PGM2L1Q6PCE3 622 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 YTHDF3Q7Z739 585 aaKnown RBP16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 VRK2Q86Y07 508 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 SLC30A8Q8IWU4 369 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 ULK2Q8IYT8 1036 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 FBXW8Q8N3Y1 598 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 POGLUT1Q8NBL1 392 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 PAQR8Q8TEZ7 354 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 TMCO6Q96DC7 493 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 SGCZQ96LD1 299 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 RTN4RQ9BZR6 473 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 METTL7AQ9H8H3 244 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 MTHFD2LQ9H903 347 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 GALNT9Q9HCQ5 603 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 KLHL1Q9NR64 748 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 UBQLN4Q9NRR5 601 aa16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 GPC6Q9Y625 555 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC4-203ENST00000447216 A0A0G2JMM0 328 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 A0A1W2PPB8 328 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 A0A1W2PRS3 328 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 KIR3DP1A8MWS1 328 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 M0QX08 132 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 SCDO00767 359 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 SLC25A12O75746 678 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 GUSBP08236 651 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 GGT1P19440 569 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 TBXA2RP21731 343 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 RPS4Y1P22090 263 aaKnown RBP16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 PTGDSP41222 190 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 CASP3P42574 277 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 TNFSF10P50591 281 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 CRYBA2P53672 197 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF141Q15928 474 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 SPATS1Q496A3 300 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 LRRC23Q53EV4 343 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 INTS11Q5TA45 600 aaKnown RBP16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 AP1ARQ63HQ0 302 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 GLYATQ6IB77 296 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 CCDC80Q76M96 950 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 MARCH3Q86UD3 253 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZADH2Q8N4Q0 377 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 GOLM1Q8NBJ4 401 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 PSD4Q8NDX1 1056 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 TNIP2Q8NFZ5 429 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 OR52P1PQ8NH57 321 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 TAMM41Q96BW9 452 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 RSPO3Q9BXY4 272 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 MFRPQ9BY79 579 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 HOXD1Q9GZZ0 328 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms