RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 WDR25Q64LD2 544 aaPredicted RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 ZNF790Q6PG37 636 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 CENPQQ7L2Z9 268 aaPredicted RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 SCD5Q86SK9 330 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 CEP112Q8N8E3 955 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 Q8N9G6 341 aaPredicted RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 BBS1Q8NFJ9 593 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 DMBX1Q8NFW5 382 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 OR10A7Q8NGE5 316 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 OR1K1Q8NGR3 316 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 FAM81AQ8TBF8 368 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 SLCO2A1Q92959 643 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 TMEM143Q96AN5 459 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 LRRC39Q96DD0 335 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 TRIM62Q9BVG3 475 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 SIX2Q9NPC8 291 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC7A8Q9UHI5 535 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 VANGL2Q9ULK5 521 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 ABCG2Q9UNQ0 655 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 DHRS7Q9Y394 339 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 METP08581 1390 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 FRMPD4Q14CM0 1322 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 LOC100653049A0A140TA62 436 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 A0A1W2PPV9 198 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 TRDMT1O14717 391 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 CASKO14936 926 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 KRT34O76011 436 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 CA1P00915 261 aaPredicted RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 CSTAP01040 98 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 IGHG4P01861 327 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 FTH1P02794 183 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 EDN1P05305 212 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 PRKAR1AP10644 381 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 PRKACAP17612 351 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 GPR183P32249 361 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 ID1P41134 155 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 LEPRP48357 1165 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 NOVA1P51513 510 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 XGP55808 180 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 ABCE1P61221 599 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 NTHL1P78549 312 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 OGDHQ02218 1023 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 SRSF4Q08170 494 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 RBBP4Q09028 425 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 KLRB1Q12918 225 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 CRMP1Q14194 572 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 ZRSR1Q15695 479 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 CD226Q15762 336 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 CHRNA6Q15825 494 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 PPP1R3AQ16821 1122 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC5A12Q1EHB4 618 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 WDR38Q5JTN6 314 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 SLX4IPQ5VYV7 408 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 WSCD1Q658N2 575 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 ZNF772Q68DY9 489 aaPredicted RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 ACSM5Q6NUN0 579 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 TMEM53Q6P2H8 277 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 KIF6Q6ZMV9 814 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 EIF3MQ7L2H7 374 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 HSD11B1LQ7Z5J1 315 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 RBM23Q86U06 439 aaKnown RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 NFE4Q86UQ8 179 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 PQLC3Q8N755 202 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 ICA1LQ8NDH6 482 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 OR4K14Q8NGD5 310 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 OR5L2Q8NGL0 311 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 OR10G8Q8NGN5 311 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 OR13F1Q8NGS4 319 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 LILRB4Q8NHJ6 448 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 NRGNQ92686 78 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 PRRC1Q96M27 445 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 TECTBQ96PL2 329 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 DUX5Q96PT3 197 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 ANKRD60Q9BZ19 345 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 PITPNM3Q9BZ71 974 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 SUDS3Q9H7L9 328 aaPredicted RBP4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 NMUR1Q9HB89 426 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC17A5Q9NRA2 495 aa4.49□□□□□ -1.69
TM9SF3-202ENST00000443638 SAA2-SAA4A0A096LPE2 208 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 CIDEAO60543 219 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 RAMP3O60896 148 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 PPP1R3DO95685 299 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 JCHAINP01591 159 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 HOXB7P09629 217 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 HSMCR30P0CW71 290 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 BCKDHAP12694 445 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 SAA4P35542 130 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 HSD17B2P37059 387 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 STK19P49842 368 aaPredicted RBP4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 DVL1P1P54792 670 aaPredicted RBP4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 RGS8P57771 180 aaPredicted RBP4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 DAOAP59103 153 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 GUCY2DQ02846 1103 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 SRSF7Q16629 238 aaKnown RBP eCLIP4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 SGSM1Q2NKQ1 1148 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 SBK1Q52WX2 424 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 UNC50Q53HI1 259 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 LIN9Q5TKA1 542 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 CREB3L2Q70SY1 520 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms