RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 GDF7Q7Z4P5 450 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZAR1Q86SH2 424 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MARCH3Q86UD3 253 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TRIM42Q8IWZ5 723 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 KIRREL3Q8IZU9 778 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GATSQ8NAP1 163 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR56A1Q8NGH5 318 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR5P2Q8WZ92 322 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TLCD1Q96CP7 247 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DTNBP1Q96EV8 351 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 C16orf58Q96GQ5 468 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 POM121Q96HA1 1249 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 WDYHV1Q96HA8 205 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TRIB1Q96RU8 372 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PRPF18Q99633 342 aaKnown RBP8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RTN4RQ9BZR6 473 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TRIM8Q9BZR9 551 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DSN1Q9H410 356 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ALG2Q9H553 416 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CXorf36Q9H7Y0 433 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TMBIM4Q9HC24 238 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NEUROD4Q9HD90 331 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PNPOQ9NVS9 261 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ASIC5Q9NY37 505 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MED11Q9P086 117 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NTMQ9P121 344 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HAO1Q9UJM8 370 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PCDHGB3Q9Y5G1 929 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TOXO94900 526 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HMGN2P05204 90 aaKnown RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 LBPP18428 481 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MAP3K8P41279 467 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CCT3P49368 545 aaKnown RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 STARP49675 285 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CLK3P49761 638 aaKnown RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DSCR4P56555 118 aaPredicted RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CLDN8P56748 225 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 C21orf58P58505 322 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TFF3Q07654 80 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RCAN2Q14206 197 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 LSM12Q3MHD2 195 aaKnown RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NSUN5P2Q63ZY6 315 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR4F3Q6IEY1 312 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 AAGABQ6PD74 315 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ENPP6Q6UWR7 440 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 LACC1Q8IV20 430 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 LIX1LQ8IVB5 337 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RIMKLAQ8IXN7 391 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CLECL1Q8IZS7 167 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FADS6Q8N9I5 356 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NAXEQ8NCW5 288 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TNIP2Q8NFZ5 429 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR2M3Q8NG83 312 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR5AK3PQ8NH89 298 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HOXB13Q92826 284 aaPredicted RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CDS1Q92903 461 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 COQ8BQ96D53 544 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DUSP26Q9BV47 211 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DPY30Q9C005 99 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 BHLHE41Q9C0J9 482 aaPredicted RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SDHAF3Q9NRP4 125 aa8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FAF1Q9UNN5 650 aaPredicted RBP8.36□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RNF103-CHMP3A0A140T963 221 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HSPB2A8KAH6 182 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SDHDO14521 159 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DVL2O14641 736 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SEC14L5O43304 696 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 KCNK2O95069 426 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OXSR1O95747 527 aaPredicted RBP8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ANGPTL1O95841 491 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 EPPINO95925 133 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 KRT16P08779 473 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 KITP10721 976 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HPGDP15428 266 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HK1P19367 917 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 POU3F2P20265 443 aaPredicted RBP8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ATP6V1C1P21283 382 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 BMP5P22003 454 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MSX1P28360 303 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GSK3AP49840 483 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 LHX2P50458 406 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GFRA1P56159 465 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NME5P56597 212 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HBA1P69905 142 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 POU6F2P78424 691 aaPredicted RBP8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GANABQ14697 944 aaKnown RBP8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SF3B4Q15427 424 aaKnown RBP eCLIP8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HSPB2Q16082 182 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SMU1Q2TAY7 513 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SLC25A35Q3KQZ1 300 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 EXOSC6Q5RKV6 272 aaKnown RBP8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ATG16L1Q676U5 607 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CDC73Q6P1J9 531 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZCCHC12Q6PEW1 402 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PLXDC2Q6UX71 529 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 APOOLQ6UXV4 268 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CAMKMTQ7Z624 323 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms