RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 GRAMD2AQ8IUY3 354 aa16.69■□□□□ 0.26
GPC1-205ENST00000427506 UBQLNLQ8IYU4 475 aa16.69■□□□□ 0.26
GPC1-205ENST00000427506 NATD1Q8N6N6 113 aa16.69■□□□□ 0.26
GPC1-205ENST00000427506 ZNF781Q8N8C0 355 aa16.69■□□□□ 0.26
GPC1-205ENST00000427506 COX18Q8N8Q8 333 aa16.69■□□□□ 0.26
GPC1-205ENST00000427506 OR5P2Q8WZ92 322 aa16.69■□□□□ 0.26
GPC1-205ENST00000427506 HOXB13Q92826 284 aaPredicted RBP16.69■□□□□ 0.26
GPC1-205ENST00000427506 RNASE6Q93091 150 aaKnown RBP16.69■□□□□ 0.26
GPC1-205ENST00000427506 FAM120BQ96EK7 910 aaKnown RBP16.69■□□□□ 0.26
GPC1-205ENST00000427506 OTUB1Q96FW1 271 aaPredicted RBP16.69■□□□□ 0.26
GPC1-205ENST00000427506 PAIP2Q9BPZ3 127 aaKnown RBP16.69■□□□□ 0.26
GPC1-205ENST00000427506 ZNF395Q9H8N7 513 aaPredicted RBP16.69■□□□□ 0.26
GPC1-205ENST00000427506 MYO9AB2RTY4 2548 aa16.69■□□□□ 0.26
GPC1-205ENST00000427506 FBN2P35556 2912 aa16.69■□□□□ 0.26
GPC1-205ENST00000427506 CFLARO15519 480 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 KCNK2O95069 426 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 HPGDP15428 266 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 POU3F2P20265 443 aaPredicted RBP16.68■□□□□ 0.26
GPC1-205ENST00000427506 SLC1A6P48664 564 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 CLDN18P56856 261 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 BCL2A1Q16548 175 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 LSM12Q3MHD2 195 aaKnown RBP16.68■□□□□ 0.26
GPC1-205ENST00000427506 POMZP3Q6PJE2 187 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 PLXDC2Q6UX71 529 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 P4HA3Q7Z4N8 544 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 ZZZ3Q8IYH5 903 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 MEIOBQ8N635 442 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 KRTCAP2Q8N6L1 136 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 OR5M1Q8NGP8 315 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 NUDT8Q8WV74 236 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 WNT2BQ93097 391 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 ZFP3Q96NJ6 502 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 SH3GL2Q99962 352 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 SIRT3Q9NTG7 399 aaPredicted RBP16.68■□□□□ 0.26
GPC1-205ENST00000427506 FOXD3Q9UJU5 478 aaPredicted RBP16.68■□□□□ 0.26
GPC1-205ENST00000427506 RAP2CQ9Y3L5 183 aa16.68■□□□□ 0.26
GPC1-205ENST00000427506 NDUFB5O43674 189 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 RCBTB2O95199 551 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 C6orf47O95873 294 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 IL18BPO95998 194 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 HMGN2P05204 90 aaKnown RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 G6PDP11413 515 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 CCT3P49368 545 aaKnown RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 DIO3P55073 304 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 B3GALT5-AS1P59052 145 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 POU6F2P78424 691 aaPredicted RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 EMX2Q04743 252 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 TP53BP2Q13625 1128 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 LASP1Q14847 261 aaKnown RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 PGS1Q32NB8 556 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 APOOLQ6UXV4 268 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 ADGRE4PQ86SQ3 457 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 CDH24Q86UP0 819 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 OR4C3Q8NH37 302 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 GOT1L1Q8NHS2 421 aaPredicted RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 INTS12Q96CB8 462 aaKnown RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 C1GALT1C1Q96EU7 318 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 UCN2Q96RP3 112 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 PIGQQ9BRB3 760 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 G6PC3Q9BUM1 346 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 ACBD3Q9H3P7 528 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 HHATLQ9HCP6 504 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 NOP53Q9NZM5 478 aaKnown RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 CLCF1Q9UBD9 225 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 FAF1Q9UNN5 650 aaPredicted RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.67■□□□□ 0.26
GPC1-205ENST00000427506 ZNF337Q9Y3M9 751 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 ACTL7BQ9Y614 415 aa16.67■□□□□ 0.26
GPC1-205ENST00000427506 ALG1L2C9J202 215 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 H3BML4 177 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 LINC01387J3KSC0 135 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 SEC14L5O43304 696 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 SNUPNO95149 360 aaKnown RBP16.66■□□□□ 0.26
GPC1-205ENST00000427506 OXSR1O95747 527 aaPredicted RBP16.66■□□□□ 0.26
GPC1-205ENST00000427506 TBXA2RP21731 343 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 BGNP21810 368 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 RPL14P50914 215 aaKnown RBP16.66■□□□□ 0.26
GPC1-205ENST00000427506 EEFSECP57772 596 aaKnown RBP16.66■□□□□ 0.26
GPC1-205ENST00000427506 FOXF2Q12947 444 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 STX3Q13277 289 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.66■□□□□ 0.26
GPC1-205ENST00000427506 FBXL19-AS1Q494R0 122 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 CCNJQ5T5M9 372 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 KIF18BQ86Y91 864 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 GCNT2Q8N0V5 402 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 ANKRD42Q8N9B4 389 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 GATSQ8NAP1 163 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 OR56A1Q8NGH5 318 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 FAM110BQ8TC76 370 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 ADAMTS15Q8TE58 950 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 SMPDL3BQ92485 455 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 COQ8BQ96D53 544 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 PGM2Q96G03 612 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 DUSP26Q9BV47 211 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 SFXN3Q9BWM7 321 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 BTBD2Q9BX70 525 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 BHLHE41Q9C0J9 482 aaPredicted RBP16.66■□□□□ 0.26
GPC1-205ENST00000427506 CXorf36Q9H7Y0 433 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 AKTIPQ9H8T0 292 aa16.66■□□□□ 0.26
GPC1-205ENST00000427506 FBXO34Q9NWN3 711 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms