RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 SFXN5Q8TD22 340 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ELP4Q96EB1 424 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 TM9SF2Q99805 663 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 SLC38A1Q9H2H9 487 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 TIGARQ9NQ88 270 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 WDR70Q9NW82 654 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 POU2F3Q9UKI9 436 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 FANCMQ8IYD8 2048 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ZNF888P0CJ79 500 aaPredicted RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 NR2F6P10588 404 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 GNSP15586 552 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 GSTM3P21266 225 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 TEAD1P28347 426 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 TRHRP34981 398 aaPredicted RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 PDX1P52945 283 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 RGS8P57771 180 aaPredicted RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 RPS25P62851 125 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 SNRPNP63162 240 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 ABATP80404 500 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 CDK5Q00535 292 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 EIF2B5Q13144 721 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 KRR1Q13601 381 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 KCNJ8Q15842 424 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ENTPD8Q5MY95 495 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ARMC4Q5T2S8 1044 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 MRM1Q6IN84 353 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 SLC30A6Q6NXT4 461 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 SLC36A4Q6YBV0 504 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 PLEKHM3Q6ZWE6 761 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ADAMTS15Q8TE58 950 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 ASB15Q8WXK1 588 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 KLHDC7BQ96G42 594 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 TXNDC15Q96J42 360 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 SLC38A2Q96QD8 506 aa9.97□□□□□ -0.81
CUX1-205ENST00000425244 TXNL4BQ9NX01 149 aaKnown RBP9.97□□□□□ -0.81
CUX1-205ENST00000425244 MDC1Q14676 2089 aaKnown RBP9.96□□□□□ -0.81
CUX1-205ENST00000425244 PROM1O43490 865 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 UBXN7O94888 489 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 IGLV3-19P01714 112 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 CTSEP14091 401 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 AHRP35869 848 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 IFNGR2P38484 337 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 CD79BP40259 229 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 ETV6P41212 452 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 RABIFP47224 123 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 KIAA1024LP59773 190 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 STXBP1P61764 594 aaKnown RBP9.96□□□□□ -0.81
CUX1-205ENST00000425244 ID2Q02363 134 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 SRSF5Q13243 272 aaKnown RBP9.96□□□□□ -0.81
CUX1-205ENST00000425244 TRAM2Q15035 370 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 FLYWCH1Q4VC44 716 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 CRTC2Q53ET0 693 aaPredicted RBP9.96□□□□□ -0.81
CUX1-205ENST00000425244 PRRT3Q5FWE3 981 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 CD300LDQ6UXZ3 194 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 GDPGP1Q6ZNW5 385 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 LHFPL3Q86UP9 236 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 NKAIN4Q8IVV8 208 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 LINC00471Q8N535 108 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 CAMKK1Q8N5S9 505 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 SYT14Q8NB59 555 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 MFSD9Q8NBP5 474 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 SIMC1Q8NDZ2 872 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 PIGXQ8TBF5 258 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 TMEM163Q8TC26 289 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 GNPDA2Q8TDQ7 276 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 ASB12Q8WXK4 309 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 CES1P1Q9UKY3 287 aa9.96□□□□□ -0.81
CUX1-205ENST00000425244 PRODHO43272 600 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 SNX4O95219 450 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 IFNA8P32881 189 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 SDC2P34741 201 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 CASP3P42574 277 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 MTNR1AP48039 350 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 CCR5P51681 352 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 WNT4P56705 351 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 LARS2Q15031 903 aaKnown RBP9.96□□□□□ -0.82
CUX1-205ENST00000425244 KLHL22Q53GT1 634 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 FAM111BQ6SJ93 734 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 NRARPQ7Z6K4 114 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 ABI3BPQ7Z7G0 1075 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 AMIGO1Q86WK6 493 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 NRROSQ86YC3 692 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 SLC16A11Q8NCK7 471 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 SRFBP1Q8NEF9 429 aaKnown RBP9.96□□□□□ -0.82
CUX1-205ENST00000425244 OR52P1PQ8NH57 321 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 MOAP1Q96BY2 351 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 EFHD2Q96C19 240 aaPredicted RBP9.96□□□□□ -0.82
CUX1-205ENST00000425244 CCDC32Q9BV29 185 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 ABCB9Q9NP78 766 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 KLHL28Q9NXS3 571 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 ZMAT5Q9UDW3 170 aaKnown RBP9.96□□□□□ -0.82
CUX1-205ENST00000425244 TESQ9UGI8 421 aaKnown RBP9.96□□□□□ -0.82
CUX1-205ENST00000425244 TBC1D24Q9ULP9 559 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 CMAHPQ9Y471 501 aa9.96□□□□□ -0.82
CUX1-205ENST00000425244 CABIN1Q9Y6J0 2220 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 TECTAO75443 2155 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SNTNA6NMZ2 147 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 AP3D1O14617 1153 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 PRICKLE3O43900 615 aaPredicted RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 PIP5K1CO60331 668 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms