RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 SFRP4Q6FHJ7 346 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-203ENST00000422202 Q6ZSR6 202 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 ADAMTS18Q8TE60 1221 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 SLC17A9Q9BYT1 436 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 C12orf71A8MTZ7 269 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 B4DXG7 233 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 MAOAP21397 527 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 EFNA3P52797 238 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 ACTBP60709 375 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 ACTG1P63261 375 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 RPS26P11Q5JNZ5 115 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-203ENST00000422202 EXOSC6Q5RKV6 272 aaKnown RBP12.85□□□□□ -0.35
COL20A1-203ENST00000422202 NXPE4Q6UWF7 544 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 KLHDC8AQ8IYD2 350 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 C2CD4AQ8NCU7 369 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-203ENST00000422202 OR51L1Q8NGJ5 315 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 PSMF1Q92530 271 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 SSU72Q9NP77 194 aaKnown RBP12.85□□□□□ -0.35
COL20A1-203ENST00000422202 RABL2AQ9UBK7 228 aaPredicted RBP12.85□□□□□ -0.35
COL20A1-203ENST00000422202 RABL2BQ9UNT1 228 aa12.85□□□□□ -0.35
COL20A1-203ENST00000422202 DVL2O14641 736 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 CLIC3O95833 236 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 TIA1P31483 386 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 CSNK1A1P48729 337 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 GSK3AP49840 483 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 STC1P52823 247 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 GPX6P59796 221 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 PIGFQ07326 219 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 OR4N2Q8NGD1 307 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 NANOGQ9H9S0 305 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 SCN2AQ99250 2005 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 DCDC2BA2VCK2 349 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 TRAPPC2LH3BP13 241 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 SEC14L2O76054 403 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 CNIH1O95406 144 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 PAHP00439 452 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 PPP5CP53041 499 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 GNB1P62873 340 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 OR5D14Q8NGL3 314 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 TMEM59Q9BXS4 323 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 YTHDF1Q9BYJ9 559 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 DNAJB4Q9UDY4 337 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 PTBP2Q9UKA9 531 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 GJD2Q9UKL4 321 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 NWD2Q9ULI1 1742 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 PRAMEF11O60813 436 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 CHATP28329 748 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 CDKN3Q16667 212 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 C15orf52Q6ZUT6 534 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 FAM83FQ8NEG4 500 aaPredicted RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 A0A1W2PQ09 198 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 WASH4PA8MWX3 477 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 UBFD1O14562 309 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 DLX3O60479 287 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 RUNX3Q13761 415 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 NECTIN4Q96NY8 510 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 APMAPQ9HDC9 416 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 B3GNT3Q9Y2A9 372 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 A8MVM7 634 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 HCRTO43612 131 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 GSTP1P09211 210 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 ZNF45Q02386 682 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 SCCPDHQ8NBX0 429 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 RBMXL1Q96E39 390 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 PHOX2BQ99453 314 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 SPIN2AQ99865 258 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 SPIN2BQ9BPZ2 258 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 POLHQ9Y253 713 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 H3BSA7 217 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 WNT7AO00755 349 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 BMP1P13497 986 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 SMAD2Q15796 467 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 LCN10Q6JVE6 187 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 SLC35F2Q8IXU6 374 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 UPRTQ96BW1 309 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 ZNF75AQ96N20 296 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 TAS2R38P59533 333 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 BRICD5Q6PL45 260 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 OR11L1Q8NGX0 322 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 ZNF516Q92618 1163 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 AMDHD1Q96NU7 426 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 FOXN4Q96NZ1 517 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 ADAMTS10Q9H324 1103 aa12.84□□□□□ -0.35
COL20A1-203ENST00000422202 USP36Q9P275 1121 aaKnown RBP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 PUS1Q9Y606 427 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL20A1-203ENST00000422202 RAB3BP20337 219 aa12.83□□□□□ -0.35
COL20A1-203ENST00000422202 EPGNQ6UW88 154 aa12.83□□□□□ -0.35
COL20A1-203ENST00000422202 ENPP6Q6UWR7 440 aa12.83□□□□□ -0.35
COL20A1-203ENST00000422202 TRIM73Q86UV7 250 aa12.83□□□□□ -0.35
COL20A1-203ENST00000422202 ACTRT3Q9BYD9 372 aa12.83□□□□□ -0.35
COL20A1-203ENST00000422202 MYOTQ9UBF9 498 aa12.83□□□□□ -0.35
COL20A1-203ENST00000422202 MIA3Q5JRA6 1907 aa12.83□□□□□ -0.36
COL20A1-203ENST00000422202 UBL4AP11441 157 aa12.83□□□□□ -0.36
COL20A1-203ENST00000422202 GNB2P62879 340 aa12.83□□□□□ -0.36
COL20A1-203ENST00000422202 MAP4K2Q12851 820 aa12.83□□□□□ -0.36
COL20A1-203ENST00000422202 TEX26Q8N6G2 289 aa12.83□□□□□ -0.36
COL20A1-203ENST00000422202 SUMF2Q8NBJ7 301 aa12.83□□□□□ -0.36
COL20A1-203ENST00000422202 OR7G2Q8NG99 324 aa12.83□□□□□ -0.36
COL20A1-203ENST00000422202 DUSP23Q9BVJ7 150 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms