RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 APOBEC4Q8WW27 367 aaKnown RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 EFHD2Q96C19 240 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 VMP1Q96GC9 406 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 PIP5K1AQ99755 562 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 WDR77Q9BQA1 342 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 SPRY4Q9C004 299 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 NRSN2Q9GZP1 204 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 ARMC7Q9H6L4 198 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 VNN3Q9NY84 501 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 EP300Q09472 2414 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 PCNX2A6NKB5 2137 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 TRBV11-1A0A0K0K1C0 115 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 CENPVL1A0A0U1RR11 272 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 CDC14CA4D256 554 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 TNFRSF11BO00300 401 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 EI24O14681 340 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 PFDN1O60925 122 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 UGT2B17O75795 530 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 DNAJB5O75953 348 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 RASAL1O95294 804 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 IGHEP01854 428 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 GUSBP08236 651 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 RAB40ALP0C0E4 278 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 DNAJA1P31689 397 aaKnown RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 KRT20P35900 424 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 DCTP40126 519 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 RNF144AP50876 292 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 PSMD4P55036 377 aaKnown RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 CDH12P55289 794 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 SLC26A5P58743 744 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 RNF4P78317 190 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 GABREP78334 506 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 NHLH1Q02575 133 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 GANABQ14697 944 aaKnown RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 C16orf87Q6PH81 154 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 TBPL2Q6SJ96 375 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 ZNF836Q6ZNA1 936 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 TMEM179BQ7Z7N9 219 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 COMTD1Q86VU5 262 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 HIPK1Q86Z02 1210 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 PRR22Q8IZ63 422 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 NLGN4XQ8N0W4 816 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 CLIP4Q8N3C7 705 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 PACRGLQ8N7B6 248 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 AMER2Q8N7J2 671 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 NLGN4YQ8NFZ3 816 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 OR4D11Q8NGI4 311 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 MAGEE2Q8TD90 523 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 LMF1Q96S06 567 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 WFDC6Q9BQY6 131 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 SEMA4CQ9C0C4 833 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 C8orf4Q9NR00 106 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 RLIMQ9NVW2 624 aa11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 FARSAQ9Y285 508 aaKnown RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 MAGED1Q9Y5V3 778 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF9-201ENST00000415919 MUC6Q6W4X9 2439 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 LOC102723996A0A087X1L8 192 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 CLDN24A6NM45 220 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 TM4SF5O14894 197 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 PCDH17O14917 1159 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 DPM1O60762 260 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 REM1O75628 298 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 EPPINO95925 133 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 NID1P14543 1247 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 FPR1P21462 350 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 RPS4Y1P22090 263 aaKnown RBP11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 IL12BP29460 328 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 RPS18P62269 152 aaKnown RBP11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 EEF1A1P68104 462 aaKnown RBP11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 SHQ1Q6PI26 577 aaKnown RBP11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 HS3ST5Q8IZT8 346 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 ZSCAN1Q8NBB4 408 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 APCDD1LQ8NCL9 501 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 OR6T1Q8NGN1 323 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 OR52J3Q8NH60 311 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 ARHGDIGQ99819 225 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 POLR1BQ9H9Y6 1135 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 LIN28AQ9H9Z2 209 aaKnown RBP11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 RHCGQ9UBD6 479 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 KCNE5Q9UJ90 142 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 TCFL5Q9UL49 500 aa11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 PPIEQ9UNP9 301 aaKnown RBP11.6□□□□□ -0.55
PRAMEF9-201ENST00000415919 CCDC88CQ9P219 2028 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 A0A1B0GVG6 124 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 FRS3O43559 492 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 RAD1O60671 282 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 GADD45GO95257 159 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 IL33O95760 270 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 PRKACGP22612 351 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 MMP11P24347 488 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 RBMS1P29558 406 aaKnown RBP11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 OTX2P32243 289 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 ATP12AP54707 1039 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 RGS8P57771 180 aaPredicted RBP11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 PLCXD2Q0VAA5 305 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
PRAMEF9-201ENST00000415919 PCOLCEQ15113 449 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms