RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 USP22Q9UPT9 525 aa14.06□□□□□ -0.16
AP1S3-204ENST00000409375 SAMD4AQ9UPU9 718 aaKnown RBP14.06□□□□□ -0.16
AP1S3-204ENST00000409375 POMPQ9Y244 141 aa14.06□□□□□ -0.16
AP1S3-204ENST00000409375 PCDHGA9Q9Y5G4 932 aaKnown RBP14.06□□□□□ -0.16
AP1S3-204ENST00000409375 GPC6Q9Y625 555 aaPredicted RBP14.06□□□□□ -0.16
AP1S3-204ENST00000409375 DSPPQ9NZW4 1301 aa14.06□□□□□ -0.16
AP1S3-204ENST00000409375 AGAP5A6NIR3 686 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 ANKRD65E5RJM6 399 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 M0QX08 132 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 FCMRO60667 390 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 CEACAM4O75871 244 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 OR6B1O95007 311 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 UTS2O95399 124 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 IGKV1D-16P01601 117 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 THBS1P07996 1170 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 NCK1P16333 377 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 HOXB6P17509 224 aaKnown RBP14.05□□□□□ -0.16
AP1S3-204ENST00000409375 TBXA2RP21731 343 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 MSX2P35548 267 aaPredicted RBP14.05□□□□□ -0.16
AP1S3-204ENST00000409375 MAPK11Q15759 364 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 ZNF141Q15928 474 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 ZNF791Q3KP31 576 aaPredicted RBP14.05□□□□□ -0.16
AP1S3-204ENST00000409375 EIPR1Q53HC9 387 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 ZNF311Q5JNZ3 666 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 LINC00696Q6ZRV3 163 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 GALNT10Q86SR1 603 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 CMIPQ8IY22 773 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 AMER2Q8N7J2 671 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 ZNF614Q8N883 585 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 WDR60Q8WVS4 1066 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 PCDHAC1Q9H158 963 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 EVA1AQ9H8M9 152 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 TIMMDC1Q9NPL8 285 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 SDHAF3Q9NRP4 125 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.05□□□□□ -0.16
AP1S3-204ENST00000409375 FBXO34Q9NWN3 711 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 KLHL28Q9NXS3 571 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 GMPR2Q9P2T1 348 aaKnown RBP14.05□□□□□ -0.16
AP1S3-204ENST00000409375 BAG5Q9UL15 447 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 PCDHGB7Q9Y5F8 929 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 AKAP13Q12802 2813 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 MED13Q9UHV7 2174 aa14.05□□□□□ -0.16
AP1S3-204ENST00000409375 CPAMD8Q8IZJ3 1885 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 A0A1W2PQD3 144 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 TAF4O00268 1085 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 ICOSLGO75144 302 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 UGT2B11O75310 529 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 PABPC4LP0CB38 370 aaKnown RBP14.04□□□□□ -0.16
AP1S3-204ENST00000409375 FBXW4P57775 412 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 SNTA1Q13424 505 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 RAPSNQ13702 412 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 GRAMD1BQ3KR37 738 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 TBCELQ5QJ74 424 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 SLC22A10Q63ZE4 541 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 TMEM81Q6P7N7 255 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 LYPD8Q6UX82 237 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 MISPQ8IVT2 679 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 FDCSPQ8NFU4 85 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 OR5M3Q8NGP4 307 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 PROX1Q92786 737 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 DTNBP1Q96EV8 351 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 ZNF552Q9H707 407 aaPredicted RBP14.04□□□□□ -0.16
AP1S3-204ENST00000409375 METTL7AQ9H8H3 244 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 LRFN1Q9P244 771 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 DTNAQ9Y4J8 743 aa14.04□□□□□ -0.16
AP1S3-204ENST00000409375 EXPH5Q8NEV8 1989 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 OR5H15A6NDH6 313 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 PRAMEF25A6NGN4 478 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 AQP12BA6NM10 295 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 ALG1L2C9J202 215 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 SUV39H1O43463 412 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 MAN1A2O60476 641 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 UGT2B17O75795 530 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 SORBS2O94875 1100 aaKnown RBP14.03□□□□□ -0.16
AP1S3-204ENST00000409375 MFN2O95140 757 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 OXSR1O95747 527 aaPredicted RBP14.03□□□□□ -0.16
AP1S3-204ENST00000409375 ZNF682O95780 498 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 SERPINA1P01009 418 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 P04436 131 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 NID1P14543 1247 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 RPS4Y1P22090 263 aaKnown RBP14.03□□□□□ -0.16
AP1S3-204ENST00000409375 PRKAR1BP31321 381 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 ARG2P78540 354 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 MS4A2Q01362 244 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 DMTNQ08495 405 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 CYBRD1Q53TN4 286 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 PDZK1Q5T2W1 519 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 RNF220Q5VTB9 566 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 EIF3MQ7L2H7 374 aaKnown RBP14.03□□□□□ -0.16
AP1S3-204ENST00000409375 AQP12AQ8IXF9 295 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 HAS2Q92819 552 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 HGDQ93099 445 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 SMAD5Q99717 465 aaKnown RBP14.03□□□□□ -0.16
AP1S3-204ENST00000409375 PINK1Q9BXM7 581 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 SACM1LQ9NTJ5 587 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 DCAF13Q9NV06 445 aaKnown RBP14.03□□□□□ -0.16
AP1S3-204ENST00000409375 OLAHQ9NV23 265 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 KLRF1Q9NZS2 232 aa14.03□□□□□ -0.16
AP1S3-204ENST00000409375 ZNF443Q9Y2A4 671 aaPredicted RBP14.03□□□□□ -0.16
AP1S3-204ENST00000409375 SLC35A3Q9Y2D2 325 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms