RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 LGI1O95970 557 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 GASTP01350 101 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 ALPPP05187 535 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 RPLP0P05388 317 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 INHBBP09529 407 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 TYRP1P17643 537 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 TNFRSF1BP20333 461 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 CD1CP29017 333 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 MAP2K4P45985 399 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 PDX1P52945 283 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 FOXK1P85037 733 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 HYAL2Q12891 473 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 GANABQ14697 944 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 NCF4Q15080 339 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 TMEM44Q2T9K0 475 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 GPAT3Q53EU6 434 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 SLX4IPQ5VYV7 408 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 KLHL17Q6TDP4 642 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 ZNF793Q6ZN11 406 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 DEF8Q6ZN54 512 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 USP43Q70EL4 1123 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 RRM2BQ7LG56 351 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 AMER2Q8N7J2 671 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 NUP43Q8NFH3 380 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 OR9Q2Q8NGE9 314 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 OR8J1Q8NGP2 316 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 GNPDA2Q8TDQ7 276 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 RSC1A1Q92681 617 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 RAB8BQ92930 207 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 GTPBP3Q969Y2 492 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 LGALS12Q96DT0 336 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 ZHX1-C8orf76Q96EF9 292 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 PLEKHA8Q96JA3 519 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 PRRC1Q96M27 445 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 PSMG3-AS1Q96PY0 264 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 CSF3RQ99062 836 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 NRTNQ99748 197 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 CDCA4Q9BXL8 241 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 POLR2J2Q9GZM3 115 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 LRRN3Q9H3W5 708 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 KLHL31Q9H511 634 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 NDOR1Q9UHB4 597 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 CES1P1Q9UKY3 287 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 KLHL20Q9Y2M5 609 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 UNC13CQ8NB66 2214 aa12.03□□□□□ -0.48
SMARCB1-203ENST00000407082 A0A0J9YVX5 310 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 A0A1W2PQM1 296 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 OR6C74A6NCV1 312 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 PRAMEF25A6NGN4 478 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 EFCAB9A8MZ26 197 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 C2orf74A8MZ97 194 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 TMX2-CTNND1H3BSU7 103 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 KPNA4O00629 521 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 DUX1O43812 170 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 AIREO43918 545 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 NME6O75414 186 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 AIFM1O95831 613 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 GABRB1P18505 474 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 WT1P19544 449 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 CPN2P22792 545 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 CHMP24386 653 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 ELAVL4P26378 380 aaKnown RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 EPHA2P29317 976 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 MASP1P48740 699 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 XKP51811 444 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 PRKAG1P54619 331 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 BTN3A2P78410 334 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 EIF3IQ13347 325 aaKnown RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 TMED1Q13445 227 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 SPCS2Q15005 226 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 SYPL1Q16563 259 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 OCLNQ16625 522 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 TIGD6Q17RP2 521 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 RPS26P11Q5JNZ5 115 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 TMEM201Q5SNT2 666 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 RNLSQ5VYX0 342 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 TCTN3Q6NUS6 607 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 ZCCHC12Q6PEW1 402 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 TUBA3EQ6PEY2 450 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 KLHL35Q6PF15 583 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 C16orf62Q7Z3J2 963 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 CCDC71Q8IV32 467 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 CCDC116Q8IYX3 515 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 LRRC25Q8N386 305 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 GPR32P1Q8NGA4 272 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 OR4K14Q8NGD5 310 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 OR9Q1Q8NGQ5 310 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 B4GALNT2Q8NHY0 566 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 ZNF675Q8TD23 568 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 ADAMTS15Q8TE58 950 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 KLHL6Q8WZ60 621 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 SGCDQ92629 289 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 MMP27Q9H306 513 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 LYRM4Q9HD34 91 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 ZNF71Q9NQZ8 489 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 FBXO8Q9NRD0 319 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 HRASLS2Q9NWW9 162 aa12.02□□□□□ -0.49
SMARCB1-203ENST00000407082 GIN1Q9NXP7 522 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms