RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TTC36A6NLP5 189 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 C17orf105B2RV13 164 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 NPIPB9F8W1W9 429 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 OR5F1O95221 314 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 CCNYL3P0C7X3 344 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 KRT20P35900 424 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 GSSP48637 474 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 SMN1Q16637 294 aaKnown RBP13.86□□□□□ -0.19
CCT4-201ENST00000394440 RCBTB1Q8NDN9 531 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 OR7G1Q8NGA0 311 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 SLC38A4Q969I6 547 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 ITPAQ9BY32 194 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 POLR1BQ9H9Y6 1135 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 RASSF1Q9NS23 344 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 SIDT1Q9NXL6 827 aaKnown RBP13.86□□□□□ -0.19
CCT4-201ENST00000394440 ZNF226Q9NYT6 803 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 NTNG1Q9Y2I2 539 aa13.86□□□□□ -0.19
CCT4-201ENST00000394440 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
CCT4-201ENST00000394440 TARDBPQ13148 414 aaKnown RBP eCLIP13.85□□□□□ -0.196e-6■□□□□ 11.3
CCT4-201ENST00000394440 PMS2P3Q13401 168 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 FLYWCH1Q4VC44 716 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 VWA2Q5GFL6 755 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 ARHGAP40Q5TG30 622 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 COX15Q7KZN9 410 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 CCDC103Q8IW40 242 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 YIPF2Q9BWQ6 316 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 POLR2J2Q9GZM3 115 aaKnown RBP13.85□□□□□ -0.19
CCT4-201ENST00000394440 YIPF3Q9GZM5 350 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 POLR2J3Q9H1A7 115 aaKnown RBP13.85□□□□□ -0.19
CCT4-201ENST00000394440 Q9N2J8 555 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 SLC22A11Q9NSA0 550 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 PCDHGA10Q9Y5H3 936 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 WDFY4Q6ZS81 3184 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 H3BSA7 217 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 BCAS1O75363 584 aaPredicted RBP13.85□□□□□ -0.19
CCT4-201ENST00000394440 IGKV3-11P04433 115 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 SP9P0CG40 484 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 RORAP35398 523 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 SLC37A1P57057 533 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 ALDH6A1Q02252 535 aaKnown RBP13.85□□□□□ -0.19
CCT4-201ENST00000394440 COX10Q12887 443 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 ZBED5Q49AG3 693 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 C1orf189Q5VU69 101 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 PLEKHM3Q6ZWE6 761 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 DEPDC4Q8N2C3 294 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 IFI44Q8TCB0 444 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 SENP5Q96HI0 755 aaPredicted RBP13.85□□□□□ -0.19
CCT4-201ENST00000394440 CCDC74BQ96LY2 380 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 SIGLEC11Q96RL6 698 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 GPA33Q99795 319 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 MKKSQ9NPJ1 570 aaPredicted RBP13.85□□□□□ -0.19
CCT4-201ENST00000394440 PRODH2Q9UF12 536 aa13.85□□□□□ -0.19
CCT4-201ENST00000394440 FMO6PO60774 539 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 PRG2P13727 222 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 HTR2AP28223 471 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 IDH2P48735 452 aaKnown RBP13.84□□□□□ -0.19
CCT4-201ENST00000394440 PIGFQ07326 219 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 CLPPQ16740 277 aaPredicted RBP13.84□□□□□ -0.19
CCT4-201ENST00000394440 MINDY4Q4G0A6 757 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 GDF7Q7Z4P5 450 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 GRAMD2AQ8IUY3 354 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 NKAIN4Q8IVV8 208 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 C7orf57Q8NEG2 295 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 TOR1AIP2Q8NFQ8 470 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 SLC41A3Q96GZ6 507 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 EVA1AQ9H8M9 152 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 PLCXD1Q9NUJ7 323 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 TPRKBQ9Y3C4 175 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 PCDHGB1Q9Y5G3 927 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 COL27A1Q8IZC6 1860 aaPredicted RBP13.84□□□□□ -0.19
CCT4-201ENST00000394440 IGLV3-12A0A075B6K2 115 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 SYPP08247 313 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 TNNI3P19429 210 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 DRD5P21918 477 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 PCMT1P22061 227 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 IFNA8P32881 189 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 RAB39AQ14964 217 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 ELAVL1Q15717 326 aaKnown RBP13.84□□□□□ -0.19
CCT4-201ENST00000394440 ZNF141Q15928 474 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 DECR1Q16698 335 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 SLX4IPQ5VYV7 408 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 TMEM236Q5W0B7 351 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 GPR141Q7Z602 305 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 RANBP3LQ86VV4 465 aaPredicted RBP13.84□□□□□ -0.19
CCT4-201ENST00000394440 SLITRK4Q8IW52 837 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 TMEM151BQ8IW70 566 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 ZNF321PQ8N8H1 164 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 ACOT11Q8WXI4 607 aaPredicted RBP13.84□□□□□ -0.19
CCT4-201ENST00000394440 NODALQ96S42 347 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 TUBA1CQ9BQE3 449 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 RHNO1Q9BSD3 238 aa13.84□□□□□ -0.19
CCT4-201ENST00000394440 PNO1Q9NRX1 252 aaKnown RBP13.84□□□□□ -0.19
CCT4-201ENST00000394440 TIAF1O95411 115 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 SOX14O95416 240 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 DDAH2O95865 285 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 IGFBP1P08833 259 aaPredicted RBP13.83□□□□□ -0.2
CCT4-201ENST00000394440 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 CSNK2BP67870 215 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 NHLH1Q02575 133 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 NEDD8Q15843 81 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms