RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 PRAMEF25A6NGN4 478 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 ARGFXA6NJG6 315 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 G3V2T6 193 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 MASP2O00187 686 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 PEX12O00623 359 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 PCDH17O14917 1159 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 NKX2-2O95096 273 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 IFNW1P05000 195 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 PABPC4LP0CB38 370 aaKnown RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 UQCRBP14927 111 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 ITGA2P17301 1181 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 GABRA3P34903 492 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 DCTP40126 519 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 KCNC4Q03721 635 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 PPP1R8Q12972 351 aaKnown RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 ELAVL1Q15717 326 aaKnown RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 NSDHLQ15738 373 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 OTUD3Q5T2D3 398 aaPredicted RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 TYW3Q6IPR3 259 aaKnown RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 TBPL2Q6SJ96 375 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 LANCL3Q6ZV70 420 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 TSEN54Q7Z6J9 526 aaKnown RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 TMEM179BQ7Z7N9 219 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 STK32CQ86UX6 486 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 CARM1Q86X55 608 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 OR7G1Q8NGA0 311 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 VANGL1Q8TAA9 524 aaPredicted RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 PTPMT1Q8WUK0 201 aaPredicted RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 C8orf44Q96CB5 159 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 FBXL20Q96IG2 436 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 VSTM2LQ96N03 204 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 ZNF300Q96RE9 604 aaPredicted RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 ZNF347Q96SE7 839 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 SDF2Q99470 211 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 PINK1Q9BXM7 581 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 AMBRA1Q9C0C7 1298 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 ZNF350Q9GZX5 532 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 DTX4Q9Y2E6 619 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
PTN-202ENST00000393083 AP4B1Q9Y6B7 739 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 CLCA3PQ9Y6N3 262 aa12.54□□□□□ -0.4
PTN-202ENST00000393083 GXYLT2A0PJZ3 443 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 C7orf72A4D263 438 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 SYNDIG1LA6NDD5 238 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 CLPSP04118 112 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 COX6A1P12074 109 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 RRM2P31350 389 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 PSG6Q00889 435 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 SPIBQ01892 262 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 CHAF1BQ13112 559 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 DAG1Q14118 895 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 DCAF10Q5QP82 559 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 SHQ1Q6PI26 577 aaKnown RBP12.53□□□□□ -0.4
PTN-202ENST00000393083 ANKRD37Q7Z713 158 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 HIPK1Q86Z02 1210 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 HS3ST5Q8IZT8 346 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 ZNF619Q8N2I2 560 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 ZNF615Q8N8J6 731 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 C16orf52Q8NHV5 167 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 MAGEE2Q8TD90 523 aaPredicted RBP12.53□□□□□ -0.4
PTN-202ENST00000393083 RMND5BQ96G75 393 aaPredicted RBP12.53□□□□□ -0.4
PTN-202ENST00000393083 RSPO3Q9BXY4 272 aaPredicted RBP12.53□□□□□ -0.4
PTN-202ENST00000393083 ITPAQ9BY32 194 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 ZNF700Q9H0M5 742 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 ING2Q9H160 280 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 Q9H521 79 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 PRODH2Q9UF12 536 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 MKLN1Q9UL63 735 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 RAB26Q9ULW5 256 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 TESMINQ9Y4I5 508 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 MAGED1Q9Y5V3 778 aaPredicted RBP12.53□□□□□ -0.4
PTN-202ENST00000393083 ENPP4Q9Y6X5 453 aa12.53□□□□□ -0.4
PTN-202ENST00000393083 IGHV1-45A0A0A0MS14 117 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 J3KTA2 159 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 ADAMDEC1O15204 470 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 FCMRO60667 390 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 DPM1O60762 260 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 STX11O75558 287 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 DNAJB5O75953 348 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 SOX30O94993 753 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 FPR1P21462 350 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 DNAJA1P31689 397 aaKnown RBP12.52□□□□□ -0.4
PTN-202ENST00000393083 YAP1P46937 504 aaKnown RBP12.52□□□□□ -0.4
PTN-202ENST00000393083 ALDH3A2P51648 485 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 PCOLCEQ15113 449 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 GPR68Q15743 365 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 ZNF311Q5JNZ3 666 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 FIGNL1Q6PIW4 674 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 NPSR1Q6W5P4 371 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 NDUFAF7Q7L592 441 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 COMTD1Q86VU5 262 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 VRK2Q86Y07 508 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 PEX5LQ8IYB4 626 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 OR52P1PQ8NH57 321 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 SLC2A12Q8TD20 617 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 METTL21AQ8WXB1 218 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms