RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 TRIB1Q96RU8 372 aa14.13□□□□□ -0.15
SDHB-201ENST00000375499 TUBA1CQ9BQE3 449 aa14.13□□□□□ -0.15
SDHB-201ENST00000375499 TMBIM4Q9HC24 238 aa14.13□□□□□ -0.15
SDHB-201ENST00000375499 KCNJ16Q9NPI9 418 aa14.13□□□□□ -0.15
SDHB-201ENST00000375499 ASIC5Q9NY37 505 aa14.13□□□□□ -0.15
SDHB-201ENST00000375499 SNX8Q9Y5X2 465 aa14.13□□□□□ -0.15
SDHB-201ENST00000375499 KCNE3Q9Y6H6 103 aa14.13□□□□□ -0.15
SDHB-201ENST00000375499 TTC36A6NLP5 189 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 ANKRD28O15084 1053 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 GMFGO60234 142 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 KCNH1O95259 989 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 OXSR1O95747 527 aaPredicted RBP14.12□□□□□ -0.15
SDHB-201ENST00000375499 ACTL6AO96019 429 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 HMGN2P05204 90 aaKnown RBP14.12□□□□□ -0.15
SDHB-201ENST00000375499 MYZAPP0CAP1 466 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 PRPS1L1P21108 318 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 RPL3P39023 403 aaKnown RBP14.12□□□□□ -0.15
SDHB-201ENST00000375499 DLX5P56178 289 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 CLDN8P56748 225 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 CLDN18P56856 261 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 C21orf58P58505 322 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 HBA1P69905 142 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 SNTB1Q13884 538 aaKnown RBP14.12□□□□□ -0.15
SDHB-201ENST00000375499 OR4F3Q6IEY1 312 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 CAMKMTQ7Z624 323 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 ADGRE4PQ86SQ3 457 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 CROCCP2Q86T23 111 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 LACC1Q8IV20 430 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 PM20D2Q8IYS1 436 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 CLECL1Q8IZS7 167 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 C9orf106Q8NAJ2 232 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 GATSQ8NAP1 163 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 OR5M1Q8NGP8 315 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 OR4C3Q8NH37 302 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 OR5AK3PQ8NH89 298 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 OR5P2Q8WZ92 322 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 JADE3Q92613 823 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 CDS1Q92903 461 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 SFXN2Q96NB2 322 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 NPAS1Q99742 590 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 DUSP26Q9BV47 211 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 SERHL2Q9H4I8 314 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 C3orf14Q9HBI5 128 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 GPATCH2Q9NW75 528 aa14.12□□□□□ -0.15
SDHB-201ENST00000375499 NOP53Q9NZM5 478 aaKnown RBP14.12□□□□□ -0.15
SDHB-201ENST00000375499 EIF3LQ9Y262 564 aaKnown RBP14.12□□□□□ -0.15
SDHB-201ENST00000375499 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.12□□□□□ -0.15
SDHB-201ENST00000375499 NPIPA5A0A0B4J1W7 369 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 MBD3L4A6NDZ8 208 aaPredicted RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 MBD3L3A6NE82 208 aaPredicted RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 MBD3L5A6NJ08 208 aaPredicted RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 CD8B2A6NJW9 211 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 SHISA8B8ZZ34 492 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 NPIPA7E9PJI5 369 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 H0YC42 278 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 SDHDO14521 159 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 ANGPTL1O95841 491 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 ALDOCP09972 364 aaKnown RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 NPIPA8P0DM63 369 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 ZNF708P17019 499 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 TIMP3P35625 211 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 TPD52P55327 224 aaPredicted RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 DSCR4P56555 118 aaPredicted RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 PHC1P78364 1004 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 PRR5P85299 388 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 TP53BP2Q13625 1128 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.11□□□□□ -0.15
SDHB-201ENST00000375499 HHATQ5VTY9 493 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 CLEC4FQ8N1N0 589 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 COX18Q8N8Q8 333 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 MBD3L2Q8NHZ7 208 aaPredicted RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 DUSP19Q8WTR2 217 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 BHLHE41Q9C0J9 482 aaPredicted RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 MEAF6Q9HAF1 191 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 SLC24A3Q9HC58 644 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 CLCF1Q9UBD9 225 aa14.11□□□□□ -0.15
SDHB-201ENST00000375499 MARCOQ9UEW3 520 aaPredicted RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 MRPS18CQ9Y3D5 142 aaKnown RBP14.11□□□□□ -0.15
SDHB-201ENST00000375499 IGLV3-32A0A0A0MS00 114 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 CLCA1A8K7I4 914 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 ALG1L2C9J202 215 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 C9JVG2 144 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 H0Y3Z8 333 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 SCN2BO60939 215 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 SNNO75324 88 aaPredicted RBP14.1□□□□□ -0.15
SDHB-201ENST00000375499 ERLIN1O75477 346 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 ALOX5P09917 674 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 CPN1P15169 458 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 HK1P19367 917 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 BMP5P22003 454 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 CCT3P49368 545 aaKnown RBP14.1□□□□□ -0.15
SDHB-201ENST00000375499 RNF144AP50876 292 aaPredicted RBP14.1□□□□□ -0.15
SDHB-201ENST00000375499 AGFG1P52594 562 aaKnown RBP14.1□□□□□ -0.15
SDHB-201ENST00000375499 PSMD4P55036 377 aaKnown RBP14.1□□□□□ -0.15
SDHB-201ENST00000375499 CLDN15P56746 228 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 RPS26P62854 115 aaKnown RBP14.1□□□□□ -0.15
SDHB-201ENST00000375499 MAD2L1Q13257 205 aaPredicted RBP14.1□□□□□ -0.15
SDHB-201ENST00000375499 CD226Q15762 336 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 SMU1Q2TAY7 513 aa14.1□□□□□ -0.15
SDHB-201ENST00000375499 PGS1Q32NB8 556 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms