RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 MC4RP32245 332 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 PLK1P53350 603 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 DHODHQ02127 395 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF90Q03938 601 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ENPP2Q13822 863 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 RPEL1Q2QD12 228 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SWSAP1Q6NVH7 229 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 GRINAQ7Z429 371 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 EID2Q8N6I1 236 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 POM121Q96HA1 1249 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF845Q96IR2 970 aaPredicted RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 C1orf74Q96LT6 269 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 IL22Q9GZX6 179 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR51I2Q9H344 312 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ERVMER34-1Q9H9K5 563 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CSNK1G1Q9HCP0 422 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 NLGN3Q9NZ94 848 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TREM2Q9NZC2 230 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TRAPPC4Q9Y296 219 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CLCA3PQ9Y6N3 262 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SALL1Q9NSC2 1324 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 LRRC3CA6NJW4 275 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 WDR1O75083 606 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SORBS2O94875 1100 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 IGHDP01880 384 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 IL5P05113 134 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR4Q2P0C623 313 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 EPHA1P21709 976 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 HOXA10P31260 410 aaPredicted RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TTPAP49638 278 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CLN3Q13286 438 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 GAMTQ14353 236 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SGCBQ16585 318 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ZC3H12AQ5D1E8 599 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 KCTD11Q693B1 232 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 STUMQ69YW2 141 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 NLRC3Q7RTR2 1065 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR2A1Q8NGT9 310 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CERKQ8TCT0 537 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 THEM6Q8WUY1 208 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 YIPF5Q969M3 257 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 MENTQ9BUN1 341 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 COMMD5Q9GZQ3 224 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ALX4Q9H161 411 aaPredicted RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CRTAC1Q9NQ79 661 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 PCDHGC4Q9Y5F7 938 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SNX11Q9Y5W9 270 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 MTCL1Q9Y4B5 1905 aaKnown RBP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 USP17L3A6NCW0 530 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 UNCXA6NJT0 531 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 BLOC1S5-TXNDC5H3BN57 136 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 CBX4O00257 560 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ISLRO14498 428 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF44P15621 663 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TIGITQ495A1 244 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SEZ6Q53EL9 994 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ACTBL2Q562R1 376 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SFT2D3Q587I9 215 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 LCLAT1Q6UWP7 414 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 USP17L1Q7RTZ2 530 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SPRED1Q7Z699 444 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 BPIFA4PQ86YQ2 179 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TEX29Q8N6K0 151 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR10A7Q8NGE5 316 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR4F5Q8NH21 305 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ROPN1LQ96C74 230 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 OR4F4Q96R69 305 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM106CQ9BVX2 250 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM191AQ9H0A3 160 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 SEMA4AQ9H3S1 761 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.67□□□□□ -1.5
SCN2A-202ENST00000375427 FBXO8Q9NRD0 319 aa5.67□□□□□ -1.5
SCN2A-202ENST00000375427 ANKARQ7Z5J8 1434 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KMT2EQ8IZD2 1858 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KIF21AQ7Z4S6 1674 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 A0A0A6YYK5 440 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 GHRHP01286 108 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 MT-ND6P03923 174 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF728P0DKX0 622 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 IDUAP35475 653 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 RIPPLY3P57055 190 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 SMAGPQ0VAQ4 97 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 OXA1LQ15070 435 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 C6orf136Q5SQH8 315 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KIAA1614Q5VZ46 1190 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 PRRC1Q96M27 445 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 THG1LQ9NWX6 298 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 AGO1Q9UL18 857 aaKnown RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 RNF24Q9Y225 148 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ERBINQ96RT1 1412 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 RALGAPBQ86X10 1494 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KLRG2A4D1S0 409 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CAPN15O75808 1086 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 KLF7O75840 302 aaPredicted RBP5.66□□□□□ -1.5
SCN2A-202ENST00000375427 MMP11P24347 488 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CD82P27701 267 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CCL23P55773 120 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CTBSQ01459 385 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 MZT1Q08AG7 82 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms