RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 CCNJQ5T5M9 372 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 ZBTB37Q5TC79 503 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 ZNF367Q7RTV3 350 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 BBS1Q8NFJ9 593 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 ELMOD3Q96FG2 381 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 WDR92Q96MX6 357 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 FOXQ1Q9C009 403 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 SMURF2Q9HAU4 748 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 SIRT7Q9NRC8 400 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 CTSFQ9UBX1 484 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 HEBP2Q9Y5Z4 205 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 IRAK3Q9Y616 596 aa9.39□□□□□ -0.91
SIN3A-201ENST00000360439 LOC100509620A0A075B734 347 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 K7EPK0 472 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ALPLP05186 524 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ATXN1LP0C7T5 689 aaKnown RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ATP1B2P14415 290 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ACVR1Q04771 509 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ZNF273Q14593 569 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 PTCHD3Q3KNS1 767 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ZNF691Q5VV52 312 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 FAM71E2Q8N5Q1 922 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ACBD4Q8NC06 268 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 FGF14Q92915 247 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SLAMF9Q96A28 289 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 OPA3Q9H6K4 179 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 RPS10P5Q9NQ39 176 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 KIAA1217Q5T5P2 1943 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 CTDSP2O14595 271 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SIGLEC6O43699 453 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 IFNA17P01571 189 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 KLKB1P03952 638 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SPIN4Q56A73 249 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SPANXN4Q5MJ08 99 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 MANEALQ5VSG8 457 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 UBQLNLQ8IYU4 475 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 DTWD1Q8N5C7 304 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SEMA6DQ8NFY4 1073 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 TSACCQ96A04 125 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 PPCDCQ96CD2 204 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 AIF1LQ9BQI0 150 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 FAM83CQ9BQN1 747 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 C1QTNF3Q9BXJ4 246 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SCML1Q9UN30 329 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 LIPT1Q9Y234 373 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 RNF6Q9Y252 685 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 OR1A2Q9Y585 309 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 WASHC1A8K0Z3 465 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 CLIC1O00299 241 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SSX4O60224 188 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 LRATO95237 230 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SPDEFO95238 335 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ACSM4P0C7M7 580 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 POU3F3P20264 500 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 HOXD9P28356 352 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 PGGT1BP53609 377 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 TAS2R60P59551 318 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 VLDLRP98155 873 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 FADDQ13158 208 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 GALNTL5Q7Z4T8 443 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 PEG10Q86TG7 708 aaKnown RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 LINC00052Q96N35 136 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 TOLLIPQ9H0E2 274 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ANKRD19PQ9H560 264 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 NPAP1Q9NZP6 1156 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 RP1L1Q8IWN7 2480 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 TRIP12Q14669 1992 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 DBX1A6NMT0 343 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 ERAL1O75616 437 aaKnown RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 GATBO75879 557 aaKnown RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 MPC1LP0DKB6 136 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SRFP11831 508 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 FOXA1P55317 472 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 CLDN8P56748 225 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 CDC20Q12834 499 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 TMEM115Q12893 351 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SLC9A3R2Q15599 337 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 COL28A1Q2UY09 1125 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 FUNDC1Q8IVP5 155 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 PARP16Q8N5Y8 322 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 RFT1Q96AA3 541 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 RAB3CQ96E17 227 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 TMEM41AQ96HV5 264 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 CITED1Q99966 193 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 DUSP26Q9BV47 211 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 OR51B6Q9H340 312 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 SGK2Q9HBY8 427 aa9.38□□□□□ -0.91
SIN3A-201ENST00000360439 LYARQ9NX58 379 aaKnown RBP9.38□□□□□ -0.91
SIN3A-201ENST00000360439 CCDC163A0A0D9SF12 145 aa9.37□□□□□ -0.91
SIN3A-201ENST00000360439 CHP2O43745 196 aa9.37□□□□□ -0.91
SIN3A-201ENST00000360439 EGFP01133 1207 aa9.37□□□□□ -0.91
SIN3A-201ENST00000360439 IGLV3-25P01717 112 aa9.37□□□□□ -0.91
SIN3A-201ENST00000360439 BMI1P35226 326 aa9.37□□□□□ -0.91
SIN3A-201ENST00000360439 THEM4Q5T1C6 240 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms