RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 UBE2KP61086 200 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 ARHGAP11BQ3KRB8 267 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 TMPRSS5Q9H3S3 457 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 SOX17Q9H6I2 414 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 PATZ1Q9HBE1 687 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 SLC2A4RGQ9NR83 387 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 EBF1Q9UH73 591 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 GJD2Q9UKL4 321 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 GLSO94925 669 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 GCH1P30793 250 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 RPS18P62269 152 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 RPS27AP62979 156 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 UBA52P62987 128 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 VAMP3Q15836 100 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 KIAA0907Q7Z7F0 614 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 OR4N5Q8IXE1 308 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 TNS2Q63HR2 1409 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 PTBP3O95758 552 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 FCER1GP30273 86 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 SYNPRQ8TBG9 265 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 SGTBQ96EQ0 304 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 ZNF160Q9HCG1 818 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 RIPK3Q9Y572 518 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 ENSAO43768 121 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 CERS5Q8N5B7 392 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 RBMXL3Q8N7X1 1067 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 IL17RDQ8NFM7 739 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 NDNFQ8TB73 568 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 ZNF599Q96NL3 588 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 NRXN1Q9ULB1 1477 aa16.44■□□□□ 0.22
CACNA1A-201ENST00000360228 RNF212BA8MTL3 300 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 RFXAPO00287 272 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 CAPNS1P04632 268 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 AKAIN1P0CW23 69 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 PGCP20142 388 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 PRAMEF8Q5VWM4 474 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 PRAMEF7Q5VXH5 474 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 OR14L1PQ8NHC6 308 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 OR52A5Q9H2C5 316 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 TUSC2O75896 110 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 SFTPDP35247 375 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 HOXA1P49639 335 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 SCAPQ12770 1279 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 NSDHLQ15738 373 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 OR4K13Q8NH42 304 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 OR5B2Q96R09 309 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 PPRC1Q5VV67 1664 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 GALNT1Q10472 559 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 STK11Q15831 433 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 PINK1Q9BXM7 581 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 CREBZFQ9NS37 354 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 DCDC2BA2VCK2 349 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 CRHBPP24387 322 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 GPM6BQ13491 265 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 ZNF718Q3SXZ3 478 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 YIF1BQ5BJH7 314 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 CES4AQ5XG92 561 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 DIO2Q92813 273 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 CASD1Q96PB1 797 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 NENFQ9UMX5 172 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 SOBPA7XYQ1 873 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 KCNAB2Q13303 367 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 HSD17B14Q9BPX1 270 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 NUBP2Q9Y5Y2 271 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 ITGB5P18084 799 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 RAB3AP20336 220 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 SSTR4P31391 388 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 KCNK12Q9HB15 430 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 ADAMTS13Q76LX8 1427 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 J3KR12 359 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 PHYHD1Q5SRE7 291 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 PLCXD3Q63HM9 321 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 ASPGQ86U10 573 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 NAT8LQ8N9F0 302 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 PLPP5Q8NEB5 264 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 GAB3Q8WWW8 586 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 MMP28Q9H239 520 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 CWH43Q9H720 699 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 SLC2A6Q9UGQ3 507 aa16.43■□□□□ 0.22
CACNA1A-201ENST00000360228 ANKRD31Q8N7Z5 1873 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 TGM5O43548 720 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 DLX3O60479 287 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 SHMT2P34897 504 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 RPS21P63220 83 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 GDPD1Q8N9F7 314 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 SGK3Q96BR1 496 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 FBXL18Q96ME1 805 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 ACKR4Q9NPB9 350 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 FANCGO15287 622 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 PI4KAP42356 2102 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 KCNC3Q14003 757 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 FAM214AQ32MH5 1076 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 PNCKQ6P2M8 343 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 OR5W2Q8NH69 310 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 PTTG3PQ9NZH4 202 aa16.42■□□□□ 0.22
CACNA1A-201ENST00000360228 CACNG2Q9Y698 323 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms