RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PDCD5O14737 125 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ITGA10O75578 1167 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 UBL3O95164 117 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 EFEMP2O95967 443 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 TFP02787 698 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ALDOBP05062 364 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ZDHHC11BP0C7U3 371 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 THBS2P35442 1172 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ATP5C1P36542 298 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 RNF144AP50876 292 aaPredicted RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 SGSHP51688 502 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 B4GALNT1Q00973 533 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 MC1RQ01726 317 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 DYRK1AQ13627 763 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 B3GNTL1Q67FW5 361 aaPredicted RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 VASNQ6EMK4 673 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ADNP2Q6IQ32 1131 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 CXorf57Q6NSI4 855 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 SEZ6L2Q6UXD5 910 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 COMMD6Q7Z4G1 85 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 RBM45Q8IUH3 476 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 EIF4E3Q8N5X7 224 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ZNF527Q8NB42 609 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 TRMT10AQ8TBZ6 339 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 C16orf78Q8WTQ4 265 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 MED8Q96G25 268 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 C20orf85Q9H1P6 137 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 SAV1Q9H4B6 383 aaPredicted RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 UBE2ZQ9H832 354 aaPredicted RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 MRPL17Q9NRX2 175 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 SLC9A8Q9Y2E8 581 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 GPR52Q9Y2T5 361 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 PLSCR5A0PG75 271 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ARHGEF33A8MVX0 844 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 SGTAO43765 313 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 GMDSO60547 372 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 UBXN7O94888 489 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 URODP06132 367 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 CD3GP09693 182 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ZNF791Q3KP31 576 aaPredicted RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 FAM71E1Q6IPT2 247 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 MED27Q6P2C8 311 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 SFXN4Q6P4A7 337 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 TPRA1Q86W33 373 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 KLBQ86Z14 1044 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 AHCYL2Q96HN2 611 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 LCORQ96JN0 433 aaPredicted RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 USB1Q9BQ65 265 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 OR6C2Q9NZP2 312 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 MARK1Q9P0L2 795 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 SEC14L3Q9UDX4 400 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 EXOGQ9Y2C4 368 aaKnown RBP13.98□□□□□ -0.17
UBAP1-202ENST00000359544 HCFC2Q9Y5Z7 792 aa13.98□□□□□ -0.17
UBAP1-202ENST00000359544 ARPC4-TTLL3A0A0A6YYG9 625 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 LRRN3E7EW58 273 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 ZNF197O14709 1029 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 IGHA1P01876 353 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 FCER2P06734 321 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 LPLP06858 475 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 CALCRP30988 508 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 HOXA1P49639 335 aaPredicted RBP13.97□□□□□ -0.17
UBAP1-202ENST00000359544 SNTB2Q13425 540 aaKnown RBP13.97□□□□□ -0.17
UBAP1-202ENST00000359544 PIN1Q13526 163 aaPredicted RBP13.97□□□□□ -0.17
UBAP1-202ENST00000359544 NAE1Q13564 534 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 GPR68Q15743 365 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 METTL11BQ5VVY1 283 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 CDC73Q6P1J9 531 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 SMARCD3Q6STE5 483 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 ZNF322Q6U7Q0 402 aaPredicted RBP13.97□□□□□ -0.17
UBAP1-202ENST00000359544 BAIAP2L2Q6UXY1 529 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 HORMAD2Q8N7B1 307 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 OR4D11Q8NGI4 311 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 COQ8AQ8NI60 647 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 ST8SIA2Q92186 375 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 ATOH1Q92858 354 aaPredicted RBP13.97□□□□□ -0.17
UBAP1-202ENST00000359544 NECAB3Q96P71 396 aaPredicted RBP13.97□□□□□ -0.17
UBAP1-202ENST00000359544 SARGQ9BW04 601 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 FAIM2Q9BWQ8 316 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 TMPRSS13Q9BYE2 586 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 LRRN3Q9H3W5 708 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 BRD9Q9H8M2 597 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 CLEC1BQ9P126 229 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 IGLV3-16A0A075B6K0 115 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 A0A1B0GVC2 190 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 A6NIN4 97 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 LILRB3O75022 631 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 RP2O75695 350 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 HMGN1P05114 100 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 TYRP14679 529 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 CXCL2P19875 107 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 NFYAP23511 347 aaPredicted RBP13.97□□□□□ -0.17
UBAP1-202ENST00000359544 NAXDQ8IW45 347 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 KLHDC8AQ8IYD2 350 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 OR4F15Q8NGB8 312 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 NEURL3Q96EH8 262 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 JAM3Q9BX67 310 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 TEX12Q9BXU0 123 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 PLA2G12AQ9BZM1 189 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 SLC39A1Q9NY26 324 aa13.97□□□□□ -0.17
UBAP1-202ENST00000359544 LGALS8O00214 317 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms