RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 DSN1Q9H410 356 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 NOX1Q9Y5S8 564 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 A0A1B0GUH1 482 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 IRGMA1A4Y4 181 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ANKUB1A6NFN9 424 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 FAM166BA8MTA8 275 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 C1QTNF9BB2RNN3 333 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 C9JVG2 144 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ANGPTL1O95841 491 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ONECUT2O95948 504 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 HLA-DQA2P01906 255 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 SP1P08047 785 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 C1QTNF9P0C862 333 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TBXA2RP21731 343 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 RPS6KA3P51812 740 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 PDE7AQ13946 482 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 VEZF1Q14119 521 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 GLYR1Q49A26 553 aaPredicted RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 FHL5Q5TD97 284 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TMEM225Q6GV28 225 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 KIRREL2Q6UWL6 708 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TMPRSS9Q7Z410 1059 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 MAELQ96JY0 434 aaKnown RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 TM9SF2Q99805 663 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 CDADC1Q9BWV3 514 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 SP140LQ9H930 580 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 IMPAD1Q9NX62 359 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 PLA2G3Q9NZ20 509 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 AP4B1Q9Y6B7 739 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 WASHC1A8K0Z3 465 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 EFCAB9A8MZ26 197 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TNFRSF11BO00300 401 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 SHOX2O60902 331 aaPredicted RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 SERPINI2O75830 405 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 IL2RAP01589 272 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 CCNA2P20248 432 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 MAP2K6P52564 334 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 CYBRD1Q53TN4 286 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ZNF605Q86T29 641 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 UEVLDQ8IX04 471 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ULK2Q8IYT8 1036 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 UBQLNLQ8IYU4 475 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 SVOPLQ8N434 492 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 GNPDA2Q8TDQ7 276 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 DEFB127Q9H1M4 99 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ZNF395Q9H8N7 513 aaPredicted RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 PPIEQ9UNP9 301 aaKnown RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 B3GNT3Q9Y2A9 372 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TRGV5A0A0B4J1U4 118 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 HCN1O60741 890 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 UBOX5O94941 541 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 RCBTB2O95199 551 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 FARS2O95363 451 aaKnown RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 ACTL6AO96019 429 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ENPP1P22413 925 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 SLC25A3Q00325 362 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TUBA3CQ13748 450 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 MPP2Q14168 576 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 HBMQ6B0K9 141 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TUBA3EQ6PEY2 450 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 OR5W2Q8NH69 310 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 DOK4Q8TEW6 326 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TMEM41AQ96HV5 264 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 C9orf16Q9BUW7 83 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 CCDC106Q9BWC9 280 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 RASSF4Q9H2L5 321 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ANKRD36A6QL64 1941 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 SULT2B1O00204 365 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 JRKO75564 520 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 H1F0P07305 194 aaKnown RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 RAE1P78406 368 aaKnown RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 NFATC3Q12968 1075 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 COL28A1Q2UY09 1125 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 PDZK1Q5T2W1 519 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ARHGAP11AQ6P4F7 1023 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 PDSS2Q86YH6 399 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 LSM14AQ8ND56 463 aaKnown RBP8.49□□□□□ -1.05
UPF2-202ENST00000357604 C1orf21Q9H246 121 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 GLRX2Q9NS18 164 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ANKRD10Q9NXR5 420 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 ST14Q9Y5Y6 855 aa8.49□□□□□ -1.05
UPF2-202ENST00000357604 TRAPPC13A5PLN9 417 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 RIIAD1A6NNX1 92 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 EIF1AYO14602 144 aaKnown RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 GADD45GO95257 159 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 CST1P01037 141 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 PIGAP37287 484 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 CARD18P57730 90 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 CDC42P60953 191 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 PCOLCEQ15113 449 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 ZNF750Q32MQ0 723 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 APLFQ8IW19 511 aaPredicted RBP8.48□□□□□ -1.05
UPF2-202ENST00000357604 OR7G2Q8NG99 324 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 OR2AJ1Q8NGZ0 328 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 WBP1Q96G27 269 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 MPP4Q96JB8 637 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 MRGPRX4Q96LA9 322 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 C3orf30Q96M34 536 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 Q96MT0 163 aa8.48□□□□□ -1.05
UPF2-202ENST00000357604 OR5B2Q96R09 309 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms