RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MSTNO14793 375 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 GYG2O15488 501 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 CLOCKO15516 846 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 SPAG7O75391 227 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 B3GALNT1O75752 331 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 CIB2O75838 187 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 TGDSO95455 350 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 TBX6O95947 436 aaPredicted RBP10.15□□□□□ -0.79
RTN3-204ENST00000354497 NCF1P14598 390 aaPredicted RBP10.15□□□□□ -0.79
RTN3-204ENST00000354497 KRT15P19012 456 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 ATP5A1P25705 553 aaKnown RBP10.15□□□□□ -0.79
RTN3-204ENST00000354497 GABRB3P28472 473 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 ENTPD1P49961 510 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 S100A12P80511 92 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 CEP78Q5JTW2 689 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 FNDC7Q5VTL7 733 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 DESI1Q6ICB0 168 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 VWA1Q6PCB0 445 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 DRICH1Q6PGQ1 229 aaPredicted RBP10.15□□□□□ -0.79
RTN3-204ENST00000354497 ENPP6Q6UWR7 440 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 DHDDSQ86SQ9 333 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 METTL25Q8N6Q8 603 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 TRIML2Q8N7C3 387 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 ACOT4Q8N9L9 421 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 SNX31Q8N9S9 440 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 SGCDQ92629 289 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 REG4Q9BYZ8 158 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 SERHL2Q9H4I8 314 aa10.15□□□□□ -0.79
RTN3-204ENST00000354497 SSU72Q9NP77 194 aaKnown RBP10.15□□□□□ -0.79
RTN3-204ENST00000354497 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 LINC00854A0A1B0GVQ3 168 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 K7EPI3 171 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 SHOXO15266 292 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 SULT1B1O43704 296 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 TLX2O43763 284 aaPredicted RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 CD5LO43866 347 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 ICMTO60725 284 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 PRKRAO75569 313 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 TNFSF13O75888 250 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 FGGP02679 453 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 AHSGP02765 367 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 MLNP12872 115 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 CPN1P15169 458 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 BTF3P20290 206 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 TCEA1P23193 301 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 PTPN6P29350 595 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 UGT2B10P36537 528 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 CASP3P42574 277 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 CBX5P45973 191 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 STARP49675 285 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 BLVRAP53004 296 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 NRG3P56975 720 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 SLC37A1P57057 533 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 EEF1A1P68104 462 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 PCDH1Q08174 1060 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 CAPRIN1Q14444 709 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 PPP1R3AQ16821 1122 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 AP5B1Q2VPB7 878 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 LSM12Q3MHD2 195 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 MMEL1Q495T6 779 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 EEF1A1P5Q5VTE0 462 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 TIGD3Q6B0B8 471 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 SCIMPQ6UWF3 145 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 ZNF704Q6ZNC4 412 aaPredicted RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 C7orf57Q8NEG2 295 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 RIT1Q92963 219 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 TMEM41AQ96HV5 264 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 MS4A14Q96JA4 679 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 TBCDQ9BTW9 1192 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 SORBS1Q9BX66 1292 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 RPF2Q9H7B2 306 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 NT5DC2Q9H857 520 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 SERHLQ9NQF3 203 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 SNX15Q9NRS6 342 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 CLCF1Q9UBD9 225 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 PTBP2Q9UKA9 531 aaKnown RBP10.14□□□□□ -0.79
RTN3-204ENST00000354497 ANK2Q01484 3957 aa10.14□□□□□ -0.79
RTN3-204ENST00000354497 ARID1AO14497 2285 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 OR6C76A6NM76 312 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 C16orf97H3BN30 126 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 RIPK2O43353 540 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 S100BP04271 92 aaPredicted RBP10.13□□□□□ -0.79
RTN3-204ENST00000354497 PCNAP12004 261 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 PGAM1P18669 254 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 HIST1H1TP22492 207 aaPredicted RBP10.13□□□□□ -0.79
RTN3-204ENST00000354497 SSTR4P31391 388 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 CCKARP32238 428 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 MAGEA6P43360 314 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 HNMTP50135 292 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 STX1BP61266 288 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 RPS13P62277 151 aaKnown RBP10.13□□□□□ -0.79
RTN3-204ENST00000354497 IGLV3-21P80748 117 aaPredicted RBP10.13□□□□□ -0.79
RTN3-204ENST00000354497 SLAMF1Q13291 335 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 TRADDQ15628 312 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 PDK4Q16654 411 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 KRTAP24-1Q3LI83 254 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 FBXO48Q5FWF7 155 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 C18orf63Q68DL7 685 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 FAM45BPQ6NSW5 357 aa10.13□□□□□ -0.79
RTN3-204ENST00000354497 CHMP1BQ7LBR1 199 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms