RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 GRAMD2AQ8IUY3 354 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 MARVELD2Q8N4S9 558 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 GALNT6Q8NCL4 622 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 C17orf47Q8NEP4 570 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 B3GNT7Q8NFL0 401 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 VANGL1Q8TAA9 524 aaPredicted RBP10.15□□□□□ -0.79
ECM1-201ENST00000346569 METTL21AQ8WXB1 218 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 MR1Q95460 341 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 DEPDC7Q96QD5 511 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 PSD2Q9BQI7 771 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 CRB3Q9BUF7 120 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 G6PC3Q9BUM1 346 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 TRIM45Q9H8W5 580 aaPredicted RBP10.15□□□□□ -0.79
ECM1-201ENST00000346569 RLIMQ9NVW2 624 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 PDP1Q9P0J1 537 aaPredicted RBP10.15□□□□□ -0.79
ECM1-201ENST00000346569 ZNF223Q9UK11 482 aaPredicted RBP10.15□□□□□ -0.79
ECM1-201ENST00000346569 PADI1Q9ULC6 663 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 WDFY3Q8IZQ1 3526 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 NPIPA5A0A0B4J1W7 369 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 C2orf92A0A1B0GVN3 265 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 NPIPA7E9PJI5 369 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 E9PQ18 207 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 PCDH17O14917 1159 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 PRKNO60260 465 aaPredicted RBP10.14□□□□□ -0.79
ECM1-201ENST00000346569 GADD45GO95257 159 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 SNAP29O95721 258 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 IL33O95760 270 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 CD63P08962 238 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 NPIPA8P0DM63 369 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 THRBP10828 461 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 CDH12P55289 794 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 SPIBQ01892 262 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 MED21Q13503 144 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 PIN1Q13526 163 aaPredicted RBP10.14□□□□□ -0.79
ECM1-201ENST00000346569 LAPTM4AQ15012 233 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 LIN52Q52LA3 116 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 COLEC12Q5KU26 742 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 HES3Q5TGS1 186 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 DHRSXQ8N5I4 330 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 DEFB124Q8NES8 71 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 OR4C3Q8NH37 302 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 WDR36Q8NI36 951 aaKnown RBP10.14□□□□□ -0.79
ECM1-201ENST00000346569 GIPC3Q8TF64 312 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 OIT3Q8WWZ8 545 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 GATA6Q92908 595 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 TP53INP1Q96A56 240 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 SDCCAG3Q96C92 435 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 HSPBAP1Q96EW2 488 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 NR1H4Q96RI1 486 aaPredicted RBP10.14□□□□□ -0.79
ECM1-201ENST00000346569 LMF1Q96S06 567 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 PRR14Q9BWN1 585 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 B3GNT4Q9C0J1 378 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 WWTR1Q9GZV5 400 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 EVA1AQ9H8M9 152 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 KLHL28Q9NXS3 571 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 SMPD3Q9NY59 655 aaPredicted RBP10.14□□□□□ -0.79
ECM1-201ENST00000346569 UBAP1Q9NZ09 502 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 PISDQ9UG56 409 aa10.14□□□□□ -0.79
ECM1-201ENST00000346569 GPN3Q9UHW5 284 aaPredicted RBP10.14□□□□□ -0.79
ECM1-201ENST00000346569 ASPMQ8IZT6 3477 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 A0A1W2PRQ8 180 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 CDHR4A6H8M9 788 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 TMEM200CA6NKL6 621 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 C9J4A7 227 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 H0YAE9 185 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 FRS3O43559 492 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 TSPAN2O60636 221 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 RPSAP08865 295 aaKnown RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 RAB40ALP0C0E4 278 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 JMJD7P0C870 316 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 CSRP1P21291 193 aaKnown RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 LCN1P31025 176 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 ADH7P40394 386 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 PSMD4P55036 377 aaKnown RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 SMIM11AP58511 58 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 RNF4P78317 190 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 DGCR6Q14129 220 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 GANABQ14697 944 aaKnown RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 NCF4Q15080 339 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 DECR1Q16698 335 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 ZSWIM7Q19AV6 140 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 EXOC3L2Q2M3D2 409 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 RFX4Q33E94 735 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 KLHL26Q53HC5 615 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 EIPR1Q53HC9 387 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 MRPL2Q5T653 305 aaKnown RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 ZNF770Q6IQ21 691 aaPredicted RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 PAPD4Q6PIY7 484 aaKnown RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 C6orf15Q6UXA7 325 aaPredicted RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 DEF8Q6ZN54 512 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 USP51Q70EK9 711 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 CHERPQ8IWX8 916 aaKnown RBP10.13□□□□□ -0.79
ECM1-201ENST00000346569 OR2Y1Q8NGV0 311 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 OR8K3Q8NH51 312 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 OR52J3Q8NH60 311 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 NR4A3Q92570 626 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 DIO2Q92813 273 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 PRRC1Q96M27 445 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 LPAR4Q99677 370 aa10.13□□□□□ -0.79
ECM1-201ENST00000346569 ADI1Q9BV57 179 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms