RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CBLP22681 906 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 CTSKP43235 329 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 DHPSP49366 369 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 SEPHS1P49903 392 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PIN1Q13526 163 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 GNA13Q14344 377 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 NPTX1Q15818 432 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PRICKLE4Q2TBC4 344 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 FGD3Q5JSP0 725 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 FAM209AQ5JX71 171 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 COLEC12Q5KU26 742 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ATAD3BQ5T9A4 648 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 MLIPQ5VWP3 458 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF770Q6IQ21 691 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 HEPHL1Q6MZM0 1159 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF773Q6PK81 442 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 KCTD8Q6ZWB6 473 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 GRAMD2AQ8IUY3 354 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 TAGAPQ8N103 731 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 Q8N9G6 341 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 AQP11Q8NBQ7 271 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 BPIFB6Q8NFQ5 453 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 OR6T1Q8NGN1 323 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ADAMTS16Q8TE57 1224 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 NMD3Q96D46 503 aaKnown RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF285Q96NJ3 590 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 TRNT1Q96Q11 434 aaKnown RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 SPATA5L1Q9BVQ7 753 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 BTBD2Q9BX70 525 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PAK1IP1Q9NWT1 392 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 IL20Q9NYY1 176 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 MAT2BQ9NZL9 334 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 TMEM9Q9P0T7 183 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 A4GNTQ9UNA3 340 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PLCL2Q9UPR0 1127 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 LIPT1Q9Y234 373 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 GPR55Q9Y2T6 319 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 CHST2Q9Y4C5 530 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 TMEM184BQ9Y519 407 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 IGHV1OR21-1A0A087WYE8 117 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 SH3PXD2BA1X283 911 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 HYKKA2RU49 373 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 A8MVJ9 347 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 TPST2O60704 377 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ZBTB11O95625 1053 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ALPPP05187 535 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 H1F0P07305 194 aaKnown RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 HTR1AP08908 422 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 UBL4AP11441 157 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 CDK4P11802 303 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ELAVL4P26378 380 aaKnown RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PMS2P3Q13401 168 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 NEDD8Q15843 81 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 SMN1Q16637 294 aaKnown RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF311Q5JNZ3 666 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 CCNJQ5T5M9 372 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PRAMEF8Q5VWM4 474 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PRAMEF7Q5VXH5 474 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 FRRS1Q6ZNA5 592 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 B3GNT8Q7Z7M8 397 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 NLGN4XQ8N0W4 816 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 SETD9Q8NE22 299 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ZDHHC12Q96GR4 267 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 AHCYL2Q96HN2 611 aaKnown RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PITX2Q99697 317 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PINK1Q9BXM7 581 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 POLR1BQ9H9Y6 1135 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PDE7BQ9NP56 450 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 FSCN3Q9NQT6 498 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 CTPS2Q9NRF8 586 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 RASSF1Q9NS23 344 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ACAD8Q9UKU7 415 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 MKLN1Q9UL63 735 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 POFUT2Q9Y2G5 429 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 PCDHGA6Q9Y5G7 932 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 DSPPQ9NZW4 1301 aa8.59□□□□□ -1.04
ATG4A-202ENST00000345734 BDP1A6H8Y1 2624 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 DUXAA6NLW8 204 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 PTGES3LE9PB15 166 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 RGS13O14921 159 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 PLOD3O60568 738 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 ANGPTL1O95841 491 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 CSF2RBP32927 897 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 ZXDAP98168 799 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 DUSP8Q13202 625 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 MAD2L1BPQ15013 274 aaPredicted RBP8.58□□□□□ -1.04
ATG4A-202ENST00000345734 NDUFA9Q16795 377 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 LYSMD4Q5XG99 296 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 TYW3Q6IPR3 259 aaKnown RBP8.58□□□□□ -1.04
ATG4A-202ENST00000345734 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.58□□□□□ -1.04
ATG4A-202ENST00000345734 PIK3R3Q92569 461 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 HRASLS5Q96KN8 279 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 APOL4Q9BPW4 351 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 PSD2Q9BQI7 771 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 ERVMER34-1Q9H9K5 563 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF304Q9HCX3 659 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 FBXO34Q9NWN3 711 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 EPHA6Q9UF33 1036 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 SLC9A8Q9Y2E8 581 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 FER1L5A0AVI2 2057 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms