RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 C16orf58Q96GQ5 468 aa14.59□□□□□ -0.07
ATG4B-201ENST00000344376 STACQ99469 402 aa14.59□□□□□ -0.07
ATG4B-201ENST00000344376 NUF2Q9BZD4 464 aa14.59□□□□□ -0.07
ATG4B-201ENST00000344376 NPDC1Q9NQX5 325 aaPredicted RBP14.59□□□□□ -0.07
ATG4B-201ENST00000344376 DUSP22Q9NRW4 184 aa14.59□□□□□ -0.07
ATG4B-201ENST00000344376 RPH3AQ9Y2J0 694 aaPredicted RBP14.59□□□□□ -0.07
ATG4B-201ENST00000344376 ITPR2Q14571 2701 aa14.59□□□□□ -0.07
ATG4B-201ENST00000344376 CACNA1CQ13936 2221 aa14.58□□□□□ -0.07
ATG4B-201ENST00000344376 KCNK2O95069 426 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 ANGPTL1O95841 491 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 IGKV1D-16P01601 117 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 NGFRP08138 427 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 HPGDP15428 266 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 LBPP18428 481 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 HK1P19367 917 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 CEACAM8P31997 349 aaPredicted RBP14.58□□□□□ -0.08
ATG4B-201ENST00000344376 DIO3P55073 304 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 POU6F2P78424 691 aaPredicted RBP14.58□□□□□ -0.08
ATG4B-201ENST00000344376 SRYQ05066 204 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 LASP1Q14847 261 aaKnown RBP14.58□□□□□ -0.08
ATG4B-201ENST00000344376 RAET1LQ5VY80 246 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 ATG16L1Q676U5 607 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 FIGNL1Q6PIW4 674 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 CAMKMTQ7Z624 323 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 TNIP2Q8NFZ5 429 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 DUSP19Q8WTR2 217 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 TREX2Q9BQ50 279 aaPredicted RBP14.58□□□□□ -0.08
ATG4B-201ENST00000344376 YIPF4Q9BSR8 244 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 BTBD2Q9BX70 525 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 ACTRT3Q9BYD9 372 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 DPY30Q9C005 99 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 CXorf36Q9H7Y0 433 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 THAP1Q9NVV9 213 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 GIN1Q9NXP7 522 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 MED11Q9P086 117 aa14.58□□□□□ -0.08
ATG4B-201ENST00000344376 MBD3L4A6NDZ8 208 aaPredicted RBP14.57□□□□□ -0.08
ATG4B-201ENST00000344376 MBD3L3A6NE82 208 aaPredicted RBP14.57□□□□□ -0.08
ATG4B-201ENST00000344376 MBD3L5A6NJ08 208 aaPredicted RBP14.57□□□□□ -0.08
ATG4B-201ENST00000344376 LINC01387J3KSC0 135 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 ZIC3O60481 467 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 IGFBP2P18065 325 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 ATP6V1C1P21283 382 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 BMP5P22003 454 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 SOAT1P35610 550 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 WNT3P56703 355 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 CBX1P83916 185 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 CASP8Q14790 479 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 CDC73Q6P1J9 531 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 GALNT10Q86SR1 603 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 LIX1LQ8IVB5 337 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 MBD3L2Q8NHZ7 208 aaPredicted RBP14.57□□□□□ -0.08
ATG4B-201ENST00000344376 RAB3IL1Q8TBN0 382 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 ADAMTS15Q8TE58 950 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 C14orf79Q96F83 325 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 OTUB1Q96FW1 271 aaPredicted RBP14.57□□□□□ -0.08
ATG4B-201ENST00000344376 TUBA1CQ9BQE3 449 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 PIGUQ9H490 435 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 MEAF6Q9HAF1 191 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 TMBIM4Q9HC24 238 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 PNPOQ9NVS9 261 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 ZNF629Q9UEG4 869 aaPredicted RBP14.57□□□□□ -0.08
ATG4B-201ENST00000344376 PCDHGB4Q9UN71 923 aa14.57□□□□□ -0.08
ATG4B-201ENST00000344376 CACNA1DQ01668 2161 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 IGLV3-32A0A0A0MS00 114 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 C17orf51A8MQB3 221 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 ALG1L2C9J202 215 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 SCDO00767 359 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 NDUFB5O43674 189 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 OXSR1O95747 527 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 POU3F2P20265 443 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 TBXA2RP21731 343 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 STARP49675 285 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 LHX2P50458 406 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 DGKQP52824 942 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 WDR4P57081 412 aaKnown RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 BCL2A1Q16548 175 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 EXOSC6Q5RKV6 272 aaKnown RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 CHMP1BQ7LBR1 199 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 MISPQ8IVT2 679 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 DMRTC2Q8IXT2 367 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 MEIOBQ8N635 442 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 VPS37AQ8NEZ2 397 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 GOT1L1Q8NHS2 421 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 FAM110BQ8TC76 370 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 CDS1Q92903 461 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 TLCD1Q96CP7 247 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 C1GALT1C1Q96EU7 318 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 TM9SF2Q99805 663 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 PIGQQ9BRB3 760 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 UBQLN4Q9NRR5 601 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 TRPC5OSA6NMA1 111 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 KDM4EB2RXH2 506 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 RNASET2O00584 256 aaKnown RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 PEPDP12955 493 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 ZNF708P17019 499 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 OPRM1P35372 400 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 PEX19P40855 299 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 ASCL1P50553 236 aa14.56□□□□□ -0.08
ATG4B-201ENST00000344376 CLNS1AP54105 237 aaKnown RBP14.56□□□□□ -0.08
ATG4B-201ENST00000344376 GABPB1Q06547 395 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms