RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 GABREP78334 506 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FOXD4Q12950 439 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PDZK1Q5T2W1 519 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SHQ1Q6PI26 577 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF605Q86T29 641 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NLGN4XQ8N0W4 816 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF441Q8N8Z8 693 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NLGN4YQ8NFZ3 816 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OR52J3Q8NH60 311 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 THAP3Q8WTV1 239 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SDCCAG3Q96C92 435 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 BARD1Q99728 777 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FARSAQ9Y285 508 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CFAP54Q96N23 3096 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 IGHV1-45A0A0A0MS14 117 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 C7orf72A4D263 438 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TNFRSF11BO00300 401 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FFAR1O14842 300 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 IL33O95760 270 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FPR1P21462 350 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FUT4P22083 530 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 MMP11P24347 488 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ARHGDIAP52565 204 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ATP12AP54707 1039 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CDH12P55289 794 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RPS15P62841 145 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TAF11Q15544 211 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NPTX1Q15818 432 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 MRPL2Q5T653 305 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CYP4Z1Q86W10 505 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 HIPK1Q86Z02 1210 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PACRGLQ8N7B6 248 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF700Q9H0M5 742 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 POLR1BQ9H9Y6 1135 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PCDHGA10Q9Y5H3 936 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 LYVE1Q9Y5Y7 322 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CNOT1A5YKK6 2376 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NPIPB9F8W1W9 429 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SLC30A4O14863 429 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TO15178 435 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RAD1O60671 282 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 REM1O75628 298 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 IGHEP01854 428 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 COX6A1P12074 109 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RGS8P57771 180 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 HOXC5Q00444 222 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 EIPR1Q53HC9 387 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ANKRD34AQ69YU3 496 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 KIRREL2Q6UWL6 708 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 C16orf47Q6ZP98 133 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 C17orf47Q8NEP4 570 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OR4C3Q8NH37 302 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DIO2Q92813 273 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 HSPBAP1Q96EW2 488 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF597Q96LX8 424 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 EPYCQ99645 322 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PRR14Q9BWN1 585 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 B3GNT4Q9C0J1 378 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SMURF2Q9HAU4 748 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 C8orf4Q9NR00 106 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ACER3Q9NUN7 267 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FLRT3Q9NZU0 649 aa13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 MRTO4Q9UKD2 239 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CDHR4A6H8M9 788 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SOCS6O14544 535 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TPST2O60704 377 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 BCAS1O75363 584 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 GADD45GO95257 159 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OTX2P32243 289 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DLSTP36957 453 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 STAT5AP42229 794 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PSMD4P55036 377 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PLCXD2Q0VAA5 305 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PIN1Q13526 163 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DNASE1L3Q13609 305 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DAG1Q14118 895 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF141Q15928 474 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 BTBD16Q32M84 506 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RNF220Q5VTB9 566 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SLC34A3Q8N130 599 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OR11G2Q8NGC1 345 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NUBPLQ8TB37 319 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ADAMTS14Q8WXS8 1223 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TP53INP1Q96A56 240 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ADOQ96SZ5 270 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CTPS2Q9NRF8 586 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PDP1Q9P0J1 537 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 KCND3Q9UK17 655 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 A4GNTQ9UNA3 340 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 GVINP1Q7Z2Y8 2422 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 H0YJX3 145 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 STMND1H3BQB6 276 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PCDH17O14917 1159 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 GKN3PP0CG01 181 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 F8A1P23610 371 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ABCD3P28288 659 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 IL12BP29460 328 aa13.59□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ALDH3A2P51648 485 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms