RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TUBA3CQ13748 450 aa15□□□□□ -0.01
SYNM-201ENST00000328642 TMEM151BQ8IW70 566 aa15□□□□□ -0.01
SYNM-201ENST00000328642 HCAR2Q8TDS4 363 aa15□□□□□ -0.01
SYNM-201ENST00000328642 TMEM255BQ8WV15 326 aa15□□□□□ -0.01
SYNM-201ENST00000328642 ADAD1Q96M93 576 aaKnown RBP15□□□□□ -0.01
SYNM-201ENST00000328642 SPATA2Q9UM82 520 aa15□□□□□ -0.01
SYNM-201ENST00000328642 IFT52Q9Y366 437 aa15□□□□□ -0.01
SYNM-201ENST00000328642 GXYLT2A0PJZ3 443 aa15□□□□□ -0.01
SYNM-201ENST00000328642 FGF17O60258 216 aa15□□□□□ -0.01
SYNM-201ENST00000328642 CBFA2T3O75081 653 aa15□□□□□ -0.01
SYNM-201ENST00000328642 EDNRAP25101 427 aa15□□□□□ -0.01
SYNM-201ENST00000328642 BTG2P78543 158 aa15□□□□□ -0.01
SYNM-201ENST00000328642 SLC48A1Q6P1K1 146 aa15□□□□□ -0.01
SYNM-201ENST00000328642 OR7G2Q8NG99 324 aa15□□□□□ -0.01
SYNM-201ENST00000328642 ZFAND2BQ8WV99 257 aa15□□□□□ -0.01
SYNM-201ENST00000328642 TRNT1Q96Q11 434 aaKnown RBP15□□□□□ -0.01
SYNM-201ENST00000328642 SPATA9Q9BWV2 254 aa15□□□□□ -0.01
SYNM-201ENST00000328642 DDX31Q9H8H2 851 aaKnown RBP15□□□□□ -0.01
SYNM-201ENST00000328642 ACER3Q9NUN7 267 aa15□□□□□ -0.01
SYNM-201ENST00000328642 VDAC3Q9Y277 283 aa15□□□□□ -0.01
SYNM-201ENST00000328642 WBP11Q9Y2W2 641 aaKnown RBP15□□□□□ -0.01
SYNM-201ENST00000328642 HYKKA2RU49 373 aa15□□□□□ -0.01
SYNM-201ENST00000328642 ADORA3P0DMS8 318 aa15□□□□□ -0.01
SYNM-201ENST00000328642 APOFQ13790 326 aa15□□□□□ -0.01
SYNM-201ENST00000328642 CEP78Q5JTW2 689 aa15□□□□□ -0.01
SYNM-201ENST00000328642 MZT2AQ6P582 158 aa15□□□□□ -0.01
SYNM-201ENST00000328642 C11orf88Q6PI97 169 aa15□□□□□ -0.01
SYNM-201ENST00000328642 ADGRF3Q8IZF5 1079 aa15□□□□□ -0.01
SYNM-201ENST00000328642 C9orf43Q8TAL5 461 aaPredicted RBP15□□□□□ -0.01
SYNM-201ENST00000328642 MRPL48Q96GC5 212 aaKnown RBP15□□□□□ -0.01
SYNM-201ENST00000328642 WACQ9BTA9 647 aa15□□□□□ -0.01
SYNM-201ENST00000328642 IDH3BO43837 385 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 PIP5K1CO60331 668 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 RAB36O95755 333 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 FUCA1P04066 466 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 LSM11P83369 360 aaKnown RBP eCLIP14.99□□□□□ -0.01
SYNM-201ENST00000328642 ZNF91Q05481 1191 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 ZP2Q05996 745 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 SQSTM1Q13501 440 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 TCTN3Q6NUS6 607 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 ZNF554Q86TJ5 538 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 ZNF676Q8N7Q3 588 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 MFSD9Q8NBP5 474 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 OR13C2Q8NGS9 318 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 WSB2Q9NYS7 404 aaPredicted RBP14.99□□□□□ -0.01
SYNM-201ENST00000328642 ZC3H12DA2A288 527 aaKnown RBP14.99□□□□□ -0.01
SYNM-201ENST00000328642 UNC119BA6NIH7 251 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 CENPXA8MT69 81 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 CHRM4P08173 479 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 PSKH1P11801 424 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 OR1D5P58170 312 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 KIAA0895LQ68EN5 471 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 EGFL6Q8IUX8 553 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 LACC1Q8IV20 430 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 NEIL3Q8TAT5 605 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 CENPOQ9BU64 300 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 VWA8A3KMH1 1905 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 LRRN3E7EW58 273 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 K7EQS6 105 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 AKAP8O43823 692 aaKnown RBP14.99□□□□□ -0.01
SYNM-201ENST00000328642 CTSVO60911 334 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 LIPAP38571 399 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 CXCL12P48061 93 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 PLCXD2Q0VAA5 305 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 PUM1Q14671 1186 aaKnown RBP eCLIP14.99□□□□□ -0.01
SYNM-201ENST00000328642 QPRTQ15274 297 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.99□□□□□ -0.01
SYNM-201ENST00000328642 OR6N2Q8NGY6 317 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 CRELD1Q96HD1 420 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 LRRN3Q9H3W5 708 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 ACSS1Q9NUB1 689 aaPredicted RBP14.99□□□□□ -0.01
SYNM-201ENST00000328642 MRPS2Q9Y399 296 aaKnown RBP14.99□□□□□ -0.01
SYNM-201ENST00000328642 PCDHGA6Q9Y5G7 932 aa14.99□□□□□ -0.01
SYNM-201ENST00000328642 H3BML4 177 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 SMAD9O15198 467 aaKnown RBP14.98□□□□□ -0.01
SYNM-201ENST00000328642 SOD1P00441 154 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 MMP11P24347 488 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 ELAVL4P26378 380 aaKnown RBP14.98□□□□□ -0.01
SYNM-201ENST00000328642 GNALP38405 381 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 KDM4DQ6B0I6 523 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 CDRT4Q8N9R6 151 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 OR10H5Q8NGA6 315 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 GAB3Q8WWW8 586 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 AP3S1Q92572 193 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 CNDP2Q96KP4 475 aaKnown RBP14.98□□□□□ -0.01
SYNM-201ENST00000328642 ZNF559Q9BR84 538 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 TEX101Q9BY14 249 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 POLDIP3Q9BY77 421 aaKnown RBP14.98□□□□□ -0.01
SYNM-201ENST00000328642 ASIC5Q9NY37 505 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 CHD5Q8TDI0 1954 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 SH3D21A4FU49 640 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 KLHL33A6NCF5 533 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 PRSS23O95084 383 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 APBB3O95704 486 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 KRR1Q13601 381 aaKnown RBP14.98□□□□□ -0.01
SYNM-201ENST00000328642 FAM69BQ5VUD6 431 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 Q7L0L9 218 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 DENND6BQ8NEG7 585 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 TMEM239Q8WW34 195 aa14.98□□□□□ -0.01
SYNM-201ENST00000328642 METTL2AQ96IZ6 378 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms