RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TIPRLO75663 272 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 UTS2O95399 124 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 EPPINO95925 133 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 FABP3P05413 133 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 CYP4B1P13584 511 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 NID1P14543 1247 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 IL7RP16871 459 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 NAGAP17050 411 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ID4P47928 161 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 EFR3AQ14156 821 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 GRAMD1BQ3KR37 738 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 DCAF10Q5QP82 559 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 JMJD6Q6NYC1 403 aaPredicted RBP9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 C16orf47Q6ZP98 133 aaPredicted RBP9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ERMP1Q7Z2K6 904 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 COMTD1Q86VU5 262 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ZDHHC21Q8IVQ6 265 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 PQLC1Q8N2U9 271 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 FGF11Q92914 225 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ADOQ96SZ5 270 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ARHGDIGQ99819 225 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 IL1RAPQ9NPH3 570 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 C6orf203Q9P0P8 240 aaPredicted RBP9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 MASP2O00187 686 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 OR2J2O76002 312 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 BAG2O95816 211 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 LGI1O95970 557 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 MT-ND1P03886 318 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 NGFRP08138 427 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 TNFRSF1BP20333 461 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 TMED10P49755 219 aaKnown RBP9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 VLDLRP98155 873 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 KCNC4Q03721 635 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 SRSF6Q13247 344 aaKnown RBP9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 NRF1Q16656 503 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ZSWIM7Q19AV6 140 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 CRTC2Q53ET0 693 aaPredicted RBP9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 PDZK1Q5T2W1 519 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 H3F3CQ6NXT2 135 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 LYPD8Q6UX82 237 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 PIWIL3Q7Z3Z3 882 aaKnown RBP9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 CMIPQ8IY22 773 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 LILRA2Q8N149 483 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 SLC5A8Q8N695 610 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF527Q8NB42 609 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 KCNE4Q8WWG9 221 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 THAP4Q8WY91 577 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 FER1L6-AS2Q96M78 137 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 RASSF4Q9H2L5 321 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ARMC7Q9H6L4 198 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 UBQLN4Q9NRR5 601 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 AGPAT4Q9NRZ5 378 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 RIMS3Q9UJD0 308 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 SLC13A4Q9UKG4 626 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 CHST2Q9Y4C5 530 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 PRAMEF25A6NGN4 478 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF354AO60765 605 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ICOSLGO75144 302 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 OXSR1O95747 527 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 IFNW1P05000 195 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 FBXO45P0C2W1 286 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 TBXA2RP21731 343 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 FASP25445 335 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 MLF1P58340 268 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 SLC34A1Q06495 639 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 AIMP2Q13155 320 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 FGFBP1Q14512 234 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ATP6AP1Q15904 470 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 KLHL26Q53HC5 615 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 CARM1Q86X55 608 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF248Q8NDW4 579 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 SNIP1Q8TAD8 396 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 LRTOMTQ8WZ04 291 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 RASL10BQ96S79 203 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 PKP2Q99959 881 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 EVA1AQ9H8M9 152 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 KLHL28Q9NXS3 571 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 FLRT3Q9NZU0 649 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 SLC9A8Q9Y2E8 581 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 YARS2Q9Y2Z4 477 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 SH3GLB1Q9Y371 365 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 DTNAQ9Y4J8 743 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF891A8MT65 544 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 hCG_2039718K7EN88 272 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 TLX3O43711 291 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 UGT2B11O75310 529 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ITGA10O75578 1167 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 WT1P19544 449 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 IQCCQ4KMZ1 466 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 MRPL2Q5T653 305 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ATP1A1-AS1Q5TC04 95 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 HMBOX1Q6NT76 420 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 RPS19BP1Q86WX3 136 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 DND1Q8IYX4 353 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 CLIP4Q8N3C7 705 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 OR4C3Q8NH37 302 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 HGDQ93099 445 aa9.42□□□□□ -0.9
VIPAS39-201ENST00000327028 ATP13A2Q9NQ11 1180 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms