RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SP4Q02446 784 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 BIKQ13323 160 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 NAE1Q13564 534 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 DOC2BQ14184 412 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 IHHQ14623 411 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 ATP6AP1LQ52LC2 224 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 FNDC3BQ53EP0 1204 aaKnown RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CARD16Q5EG05 197 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 LIN54Q6MZP7 749 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 FBXO46Q6PJ61 603 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 GSG1LQ6UXU4 331 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM91Q6ZNR0 172 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SPATA6LQ8N4H0 392 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 TRAM1L1Q8N609 369 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 RASGEF1AQ8N9B8 481 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CCDC54Q8NEL0 328 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 OR2T12Q8NG77 320 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SELENOMQ8WWX9 145 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 MAFIPQ8WZ33 124 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF707Q96C28 371 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 WDR34Q96EX3 536 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CDKN2AIPNLQ96HQ2 116 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 PPM1MQ96MI6 270 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SUCNR1Q9BXA5 334 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 EGLN1Q9GZT9 426 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SPRTNQ9H040 489 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 ABCG5Q9H222 651 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CXCL16Q9H2A7 254 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CCDC86Q9H6F5 360 aaKnown RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 KCNK12Q9HB15 430 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 MID1IP1Q9NPA3 183 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 PRDM7Q9NQW5 492 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 TEX10Q9NXF1 929 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 COMMD3Q9UBI1 195 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 LHX6Q9UPM6 363 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 MYO18AQ92614 2054 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ELOVL7A1L3X0 281 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 C17orf102A2RUQ5 167 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GPR182O15218 404 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PRKYO43930 277 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM127O75204 238 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 FGF19O95750 216 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PTBP3O95758 552 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 DRD2P14416 443 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF25P17030 456 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ADCYAP1P18509 176 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 AKT1P31749 480 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SOX3P41225 446 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 NPBWR1P48145 328 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ANXA11P50995 505 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CACNG1Q06432 222 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 RBBP4Q09028 425 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CAMK2GQ13555 558 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GTF2H3Q13889 308 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 NTRK2Q16620 822 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GSG1Q2KHT4 349 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CTSL3PQ5NE16 218 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF660Q6AZW8 331 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SBSNQ6UWP8 590 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF574Q6ZN55 896 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TMUB2Q71RG4 321 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CBLL1Q75N03 491 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF605Q86T29 641 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PDZD3Q86UT5 571 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM163Q8TC26 289 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 RAB3CQ96E17 227 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 CMTM7Q96FZ5 175 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PPP1R16AQ96I34 528 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TEX37Q96LM6 180 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PIGQQ9BRB3 760 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TMPRSS13Q9BYE2 586 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 NLNQ9BYT8 704 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ALG9Q9H6U8 611 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 BRF2Q9HAW0 419 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 BARX1Q9HBU1 254 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 RAD18Q9NS91 495 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 MRPS18AQ9NVS2 196 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 FAM120CQ9NX05 1096 aaKnown RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PDP1Q9P0J1 537 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GRHPRQ9UBQ7 328 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SLC22A14Q9Y267 594 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 PTGDR2Q9Y5Y4 395 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 DSPPQ9NZW4 1301 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 NUP210LQ5VU65 1888 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GNG14A0A1W2PPG7 69 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 MYBPHLA2RUH7 354 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 C5orf58C9J3I9 102 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 HSBP1L1C9JCN9 74 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 AP4M1O00189 453 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 FADS1O60427 444 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 SOCS5O75159 536 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TFP02787 698 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TCRBP04435 133 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 QDPRP09417 244 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF14P17017 642 aaPredicted RBP6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GDI1P31150 447 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 GALNSP34059 522 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 EVX1P49640 407 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 MPPED2Q15777 294 aa6.24□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM255AQ5JRV8 349 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms