RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 WASH2PQ6VEQ5 465 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 CCDC54Q8NEL0 328 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 OR5AK2Q8NH90 309 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 TBC1D15Q8TC07 691 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 SLC6A7Q99884 636 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 HMGB3O15347 200 aaKnown RBP12.97□□□□□ -0.33
SPAST-201ENST00000315285 LILRB3O75022 631 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 NR4A2P43354 598 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 RABIFP47224 123 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 CDNFQ49AH0 187 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 PDSS1Q5T2R2 415 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 LRIF1Q5T3J3 769 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 ANKRD54Q6NXT1 300 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 SLCO4C1Q6ZQN7 724 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 WDR53Q7Z5U6 358 aaPredicted RBP12.97□□□□□ -0.33
SPAST-201ENST00000315285 TMEM163Q8TC26 289 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 MSANTD3Q96H12 275 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 DEFB126Q9BYW3 111 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 OR6C2Q9NZP2 312 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 USP54Q70EL1 1684 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 CTDSP2O14595 271 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 F11P03951 625 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 IGFBP6P24592 240 aaPredicted RBP12.97□□□□□ -0.33
SPAST-201ENST00000315285 P2RY2P41231 377 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 ALDH3B2P48448 385 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 PRPS1P60891 318 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 PRDX1Q06830 199 aaKnown RBP12.97□□□□□ -0.33
SPAST-201ENST00000315285 SGCAQ16586 387 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 FAM76BQ5HYJ3 339 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 ZNF565Q8N9K5 539 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 ELP5Q8TE02 316 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 WDR77Q9BQA1 342 aaPredicted RBP12.97□□□□□ -0.33
SPAST-201ENST00000315285 ALOXE3Q9BYJ1 711 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 MCCC2Q9HCC0 563 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 PCDHGA3Q9Y5H0 932 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 SCN7AQ01118 1682 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 ZNF195O14628 629 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 VNN2O95498 520 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 PDX1P52945 283 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 IRF4Q15306 451 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 NSDHLQ15738 373 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 RAB11BQ15907 218 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 TCTE1Q5JU00 501 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 SLC18B1Q6NT16 456 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 FAM83HQ6ZRV2 1179 aaPredicted RBP12.97□□□□□ -0.33
SPAST-201ENST00000315285 USP53Q70EK8 1073 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 UBQLNLQ8IYU4 475 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 ZDHHC1Q8WTX9 485 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 ZNF486Q96H40 463 aaPredicted RBP12.97□□□□□ -0.33
SPAST-201ENST00000315285 OR7D2Q96RA2 312 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 ZNF700Q9H0M5 742 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 OR52D1Q9H346 318 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 PCDHB16Q9NRJ7 776 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 TMEM30AQ9NV96 361 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 TAS2R8Q9NYW2 309 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 NME7Q9Y5B8 376 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 TRBV4-1A0A0J9YWV2 114 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 C17orf113A0A1B0GUU1 675 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 F5H0A9 414 aaPredicted RBP12.97□□□□□ -0.33
SPAST-201ENST00000315285 GXYLT1Q4G148 440 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 VRK3Q8IV63 474 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 OR13C3Q8NGS6 347 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 BPIFA2Q96DR5 249 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 C1QTNF2Q9BXJ5 285 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 IER3IP1Q9Y5U9 82 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
SPAST-201ENST00000315285 A0A1W2PQ09 198 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 FAM171A2A8MVW0 826 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 CA3P07451 260 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 ERCC1P07992 297 aaPredicted RBP12.96□□□□□ -0.33
SPAST-201ENST00000315285 HERV-K104P61576 105 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 PLGLB1Q02325 96 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 TAP2Q03519 686 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 MGAT3Q09327 533 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 RIPPLY1Q0D2K3 151 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 DCST2Q5T1A1 773 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 VRK2Q86Y07 508 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 ANKLE1Q8NAG6 615 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 URM1Q9BTM9 101 aaKnown RBP12.96□□□□□ -0.33
SPAST-201ENST00000315285 ZNF717Q9BY31 904 aaPredicted RBP12.96□□□□□ -0.33
SPAST-201ENST00000315285 SYT4Q9H2B2 425 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 RDH16O75452 317 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 GASTP01350 101 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 SMIM18P0DKX4 95 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 FUT1P19526 365 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 SLC6A11P48066 632 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 ACVR1Q04771 509 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 ZC3H14Q6PJT7 736 aaKnown RBP12.96□□□□□ -0.33
SPAST-201ENST00000315285 LSM14AQ8ND56 463 aaKnown RBP12.96□□□□□ -0.33
SPAST-201ENST00000315285 DEDD2Q8WXF8 326 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 HRASLS5Q96KN8 279 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 FKBP14Q9NWM8 211 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.33
SPAST-201ENST00000315285 BCORQ6W2J9 1755 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 MEN1O00255 615 aa12.96□□□□□ -0.33
SPAST-201ENST00000315285 KIAA0355O15063 1070 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms