RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 PCDHGA10Q9Y5H3 936 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 HS6ST1O60243 411 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 SEC24DO94855 1032 aaPredicted RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 UMODP07911 640 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 RGS8P57771 180 aaPredicted RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 EXOC3L2Q2M3D2 409 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 COLEC12Q5KU26 742 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 PDZK1Q5T2W1 519 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 MRPL2Q5T653 305 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 ANKRD34AQ69YU3 496 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 ZNF614Q8N883 585 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 APCDD1LQ8NCL9 501 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 OR2Y1Q8NGV0 311 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 PHF10Q8WUB8 498 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 EFHD2Q96C19 240 aaPredicted RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 NRSN2Q9GZP1 204 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 NMNAT1Q9HAN9 279 aaPredicted RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 FOXJ2Q9P0K8 574 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 A4GNTQ9UNA3 340 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 PPIEQ9UNP9 301 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 PROB1E7EW31 1015 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 RNF144AP50876 292 aaPredicted RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 MED21Q13503 144 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 PIN1Q13526 163 aaPredicted RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 GK3PQ14409 553 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 TIPARPQ7Z3E1 657 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 TAGAPQ8N103 731 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 AMER2Q8N7J2 671 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 PRRC1Q96M27 445 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 ADI1Q9BV57 179 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 ARMC7Q9H6L4 198 aa17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 MRTO4Q9UKD2 239 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-201ENST00000298428 CDC14CA4D256 554 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 CDHR4A6H8M9 788 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 DENRO43583 198 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 SNAP29O95721 258 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 H1F0P07305 194 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 RPSAP08865 295 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 CD63P08962 238 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 THRBP10828 461 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 FUT4P22083 530 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 FOLR3P41439 243 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 LIMS1P48059 325 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 NR0B1P51843 470 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 HMGA2P52926 109 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 ATP12AP54707 1039 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 PSMD4P55036 377 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 RNF4P78317 190 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 MERTKQ12866 999 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 FOXD4Q12950 439 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 ZNF141Q15928 474 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 HSDL2Q6YN16 418 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 ZNF441Q8N8Z8 693 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 C17orf47Q8NEP4 570 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 GIPC3Q8TF64 312 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 VMP1Q96GC9 406 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 DHRS1Q96LJ7 313 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 SPRY4Q9C004 299 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 KIF17Q9P2E2 1029 aa17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 ZNF223Q9UK11 482 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-201ENST00000298428 NPIPB9F8W1W9 429 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 TO15178 435 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 IL33O95760 270 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 SLC26A5P58743 744 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 MICAQ29983 383 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 FGD3Q5JSP0 725 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 TFAP2CQ92754 450 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 RDH12Q96NR8 316 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 ALPK1Q96QP1 1244 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 FNDC11Q9BVV2 318 aa17.08■□□□□ 0.33
SEC61A2-201ENST00000298428 LOC102723996A0A087X1L8 192 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 AP3D1O14617 1153 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 PCDH17O14917 1159 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TPST2O60704 377 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 CSRP1P21291 193 aaKnown RBP17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 IGFBP5P24593 272 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 DAPP51397 102 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 SMIM11AP58511 58 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TAS2R41P59536 307 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 HOXC5Q00444 222 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TARDBPQ13148 414 aaKnown RBP eCLIP17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 ZIK1Q3SY52 487 aaPredicted RBP17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 ASCL5Q7RTU5 278 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TSPYL5Q86VY4 417 aaPredicted RBP17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 PRR22Q8IZ63 422 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 ATG16L2Q8NAA4 619 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 PIK3C3Q8NEB9 887 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 OR10G2Q8NGC3 310 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 CT55Q8WUE5 264 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 CYGBQ8WWM9 190 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 DIO2Q92813 273 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 HSPBAP1Q96EW2 488 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 CTPS2Q9NRF8 586 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TMEFF2Q9UIK5 374 aaPredicted RBP17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 ORC6Q9Y5N6 252 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TRBV4-1A0A0J9YWV2 114 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TRBV11-1A0A0K0K1C0 115 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TNFSF15O95150 251 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 TCN2P20062 427 aa17.07■□□□□ 0.32
SEC61A2-201ENST00000298428 KRT20P35900 424 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms