RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SERPINA12Q8IW75 414 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 CSNK1A1LQ8N752 337 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 OR14K1Q8NGZ2 314 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 SPRYD4Q8WW59 207 aaPredicted RBP15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 HEBP1Q9NRV9 189 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 SLC7A7Q9UM01 511 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 GABRQQ9UN88 632 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 CORINQ9Y5Q5 1042 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 AKAP12Q02952 1782 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 A0A1W2PQU0 124 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 GABRR3A8MPY1 467 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 IFNA2P01563 188 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 CD3GP09693 182 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 GABRB3P28472 473 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 PGAP1Q75T13 922 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 DNAJC5GQ8N7S2 189 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 GPR26Q8NDV2 337 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 C3orf49Q96BT1 292 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 MVB12BQ9H7P6 319 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 MAN2C1Q9NTJ4 1040 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 TAS2R8Q9NYW2 309 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 OR1A2Q9Y585 309 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 RAD51DO75771 328 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 SLC26A5P58743 744 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 HOXC5Q00444 222 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 MGAT3Q09327 533 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 AAK1Q2M2I8 961 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 UNC5DQ6UXZ4 953 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 GPR149Q86SP6 731 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 TMEM25Q86YD3 366 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 OR5W2Q8NH69 310 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 CREB3L4Q8TEY5 395 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 NEIL2Q969S2 332 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 RAB7BQ96AH8 199 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 PHRF1Q9P1Y6 1649 aaKnown RBP15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 F5H5P2 479 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 SMAD6O43541 496 aaKnown RBP15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 RAD1O60671 282 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 HPGDSO60760 199 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 PLCXD2Q0VAA5 305 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 AKR1C8PQ5T2L2 129 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 HACD4Q5VWC8 232 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 GSG1LQ6UXU4 331 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 ZER1Q7Z7L7 766 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 MFSD6LQ8IWD5 586 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 RNF175Q8N4F7 328 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 OR5AK2Q8NH90 309 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 FAM46BQ96A09 425 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 BPNT1O95861 308 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 SYN1P17600 705 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 SHC2P98077 582 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 KIAA0319Q5VV43 1072 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 METAP1DQ6UB28 335 aaPredicted RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ANKRD53Q8N9V6 530 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ANKLE1Q8NAG6 615 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 OR5AR1Q8NGP9 310 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 GGHQ92820 318 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 NEDD4LQ96PU5 975 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 TREX2Q9BQ50 279 aaPredicted RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 MYO9BQ13459 2157 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF850A8MQ14 1090 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 RNASET2O00584 256 aaKnown RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 SLC43A1O75387 559 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 CPNE6O95741 557 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ARSBP15848 533 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 PBX2P40425 430 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 CTXN1P60606 82 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 OR2T4Q8NH00 348 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 SCGB1C1Q8TD33 95 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ACTRT3Q9BYD9 372 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 OR6C2Q9NZP2 312 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ARPC1BO15143 372 aaKnown RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 C1QBP02746 253 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ERCC1P07992 297 aaPredicted RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 RNH1P13489 461 aaKnown RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ACTBP60709 375 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ACTG1P63261 375 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 FLI1Q01543 452 aaPredicted RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 SELENBP1Q13228 472 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 OPCMLQ14982 345 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF534Q76KX8 674 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 RAB11FIP2Q7L804 512 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 BOLLQ8N9W6 283 aaKnown RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ACBD4Q8NC06 268 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 BORCS8Q96FH0 119 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 KLHDC7BQ96G42 594 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF559Q9BR84 538 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 FZD3Q9NPG1 666 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 PRDM9Q9NQV7 894 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 RICTORQ6R327 1708 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 A0A0A6YYH2 397 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 A6NJ64 397 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 RAB28P51157 221 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 RPS15AP62244 130 aaKnown RBP15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 PLGLB1Q02325 96 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 FRMPD2BQ6IN97 320 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 LAS2Q8IYD9 372 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 LSMEM2Q8N112 164 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ESX1Q8N693 406 aa15.54■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF709Q8N972 641 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms