RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 RIN1Q13671 783 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 CRTC2Q53ET0 693 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 PRICKLE2Q7Z3G6 844 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ACOT11Q8WXI4 607 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 SLC9A6Q92581 669 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 UCN3Q969E3 161 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 CNRIP1Q96F85 164 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ZC3HAV1LQ96H79 300 aaKnown RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 C12orf66Q96MD2 445 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 DEPDC7Q96QD5 511 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 PLA2G12AQ9BZM1 189 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 AICDAQ9GZX7 198 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 SLC38A1Q9H2H9 487 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 MRPS30Q9NP92 439 aaKnown RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 EXOGQ9Y2C4 368 aaKnown RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 LRRK1Q38SD2 2015 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 NUMA1Q14980 2115 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 CKAP5Q14008 2032 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 A8MU76 341 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 PATE3B3GLJ2 98 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 ERI3O43414 337 aaKnown RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 PRICKLE3O43900 615 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 TRIM3O75382 744 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 ERAL1O75616 437 aaKnown RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 SERPIND1P05546 499 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 LIMS3P0CW19 117 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 LIMS4P0CW20 117 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 F3P13726 295 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 BCL6P41182 706 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 MLLT3P42568 568 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 AADACL4Q5VUY2 407 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 PSD4Q8NDX1 1056 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 SIMC1Q8NDZ2 872 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 OR52N1Q8NH53 320 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 GATAD2BQ8WXI9 593 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 OTUB1Q96FW1 271 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 OR7D2Q96RA2 312 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 EGLN3Q9H6Z9 239 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 KRCC1Q9NPI7 259 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 PHPT1Q9NRX4 125 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 TMEM74BQ9NUR3 256 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 ASB6Q9NWX5 421 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 LYARQ9NX58 379 aaKnown RBP12.06□□□□□ -0.48
C9orf3-201ENST00000277198 ATG4BQ9Y4P1 393 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 PCDHGB7Q9Y5F8 929 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 THADAQ6YHU6 1953 aa12.06□□□□□ -0.48
C9orf3-201ENST00000277198 PROM1O43490 865 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 OR5F1O95221 314 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 AIFM1O95831 613 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 IGHA1P01876 353 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 HMGN1P05114 100 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 HLA-DMAP28067 261 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 MPLP40238 635 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 SLC1A3P43003 542 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 DHPSP49366 369 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 CDH11P55287 796 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 RPS25P62851 125 aaKnown RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 BDH1Q02338 343 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 OR2G6Q5TZ20 316 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 LCN1P1Q5VSP4 162 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 WASH2PQ6VEQ5 465 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 CCDC116Q8IYX3 515 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 SAMD14Q8IZD0 417 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 TMEM203Q969S6 136 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 ELP4Q96EB1 424 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 FRMD6Q96NE9 622 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 ACTRT3Q9BYD9 372 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 KLHL31Q9H511 634 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 FSCN3Q9NQT6 498 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 DDX28Q9NUL7 540 aaKnown RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 NLGN3Q9NZ94 848 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 NTMQ9P121 344 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 CARD8Q9Y2G2 431 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 CCDC88CQ9P219 2028 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 PRR19A6NJB7 356 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 PGRMC2O15173 223 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 SURF4O15260 269 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 PPM1DO15297 605 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 KLF4O43474 513 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 CCNYL3P0C7X3 344 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 CPN2P22792 545 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 AZGP1P25311 298 aaKnown RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 HTR1FP30939 366 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 DRD3P35462 400 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 STXBP1P61764 594 aaKnown RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 FABP5Q01469 135 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 RPL6Q02878 288 aaKnown RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 HEPHL1Q6MZM0 1159 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 MZT2AQ6P582 158 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 SLC7A5P1Q8MH63 180 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 CACTIN-AS1Q8N1I8 211 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 KLHL36Q8N4N3 616 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 ARIH2OSQ8N7S6 290 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 MFSD9Q8NBP5 474 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 NUP43Q8NFH3 380 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 OR8D4Q8NGM9 314 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 OR8K5Q8NH50 307 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 OR52P1PQ8NH57 321 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 SLC7A6Q92536 515 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms