RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 QRSL1Q9H0R6 528 aaKnown RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 ING2Q9H160 280 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 OR10A5Q9H207 317 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 RIBC2Q9H4K1 309 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 Q9N2J8 555 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 C14orf105Q9NVL8 296 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 MGAT4BQ9UQ53 548 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 CHST2Q9Y4C5 530 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 ZFHX4Q86UP3 3567 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 DPPA5A6NC42 116 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 PCDH17O14917 1159 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 KCNK2O95069 426 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 CLPTM1O96005 669 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 IL7RP16871 459 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 SSTR4P31391 388 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 RPL5P46777 297 aaKnown RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 PSMD4P55036 377 aaKnown RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 TPD52P55327 224 aaPredicted RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 ISL1P61371 349 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 TOP3AQ13472 1001 aaPredicted RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 PRAMEF17Q5VTA0 474 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 GALNT5Q7Z7M9 940 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 TSPAN14Q8NG11 270 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 PTPMT1Q8WUK0 201 aaPredicted RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 ZCCHC14Q8WYQ9 949 aaKnown RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 PIK3R3Q92569 461 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 HRASLS5Q96KN8 279 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 WFDC6Q9BQY6 131 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 G6PC3Q9BUM1 346 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 CNPPD1Q9BV87 410 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 FNDC11Q9BVV2 318 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 YIPF2Q9BWQ6 316 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 DGCR6LQ9BY27 220 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 FAM192AQ9GZU8 254 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 ERVK-19Q9WJR5 959 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 PCDHGA10Q9Y5H3 936 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 CCDC88CQ9P219 2028 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 URB1O60287 2271 aaKnown RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 A0A087WXM4 84 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 C17orf105B2RV13 164 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 FMO6PO60774 539 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 CLPSP04118 112 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 CYC1P08574 325 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 CLK3P49761 638 aaKnown RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 NUP107P57740 925 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 ESRRGP62508 458 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 IL11RAQ14626 422 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 ZNF836Q6ZNA1 936 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 COX15Q7KZN9 410 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 OR14A16Q8NHC5 309 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 C16orf52Q8NHV5 167 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 ZNF566Q969W8 418 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 SLC46A1Q96NT5 459 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 DEPDC7Q96QD5 511 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 OR6C1Q96RD1 312 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 CCDC86Q9H6F5 360 aaKnown RBP14.23□□□□□ -0.13
COPS3-201ENST00000268717 BLOC1S6Q9UL45 172 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 ZMIZ1Q9ULJ6 1067 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 GMPPBQ9Y5P6 360 aa14.23□□□□□ -0.13
COPS3-201ENST00000268717 TRBV4-1A0A0J9YWV2 114 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 GXYLT2A0PJZ3 443 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 SH3PXD2BA1X283 911 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 AP3D1O14617 1153 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 OR5F1O95221 314 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 IGKV3-11P04433 115 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 FGF5P12034 268 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 TNNI3P19429 210 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 NR1H2P55055 460 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 RGS8P57771 180 aaPredicted RBP14.22□□□□□ -0.13
COPS3-201ENST00000268717 ZFP36L1Q07352 338 aaKnown RBP14.22□□□□□ -0.13
COPS3-201ENST00000268717 ST3GAL3Q11203 375 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 PIN1Q13526 163 aaPredicted RBP14.22□□□□□ -0.13
COPS3-201ENST00000268717 GPR68Q15743 365 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.22□□□□□ -0.13
COPS3-201ENST00000268717 MINDY4Q4G0A6 757 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 FGD3Q5JSP0 725 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 CCNJQ5T5M9 372 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 CD300LDQ6UXZ3 194 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 PPP1R3BQ86XI6 285 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 GRAMD2AQ8IUY3 354 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 TMEM151BQ8IW70 566 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 OR9Q2Q8NGE9 314 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 SLC7A13Q8TCU3 470 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 ADAMTS16Q8TE57 1224 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 DIO2Q92813 273 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 DAZLQ92904 295 aaKnown RBP14.22□□□□□ -0.13
COPS3-201ENST00000268717 SLC7A5P2Q9GIP4 190 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 NRSN2Q9GZP1 204 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 MAN2C1Q9NTJ4 1040 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 NDUFA13Q9P0J0 144 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 RHCGQ9UBD6 479 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 DKK4Q9UBT3 224 aa14.22□□□□□ -0.13
COPS3-201ENST00000268717 CDHR4A6H8M9 788 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 OR2W5A6NFC9 320 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 HRKO00198 91 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 SCRG1O75711 98 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 SEC24DO94855 1032 aaPredicted RBP14.21□□□□□ -0.13
COPS3-201ENST00000268717 TFAP2AP05549 437 aa14.21□□□□□ -0.13
COPS3-201ENST00000268717 CCDC159P0C7I6 412 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms