RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 DECR1Q16698 335 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 TFAP2EQ6VUC0 442 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 SZRD1Q7Z422 152 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 CEACAM19Q7Z692 300 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 SLC44A3Q8N4M1 653 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 OR6M1Q8NGM8 313 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 EXOSC8Q96B26 276 aaKnown RBP11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 FAM46AQ96IP4 442 aaKnown RBP11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 NDC1Q9BTX1 674 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 SORBS1Q9BX66 1292 aaKnown RBP11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 RHBGQ9H310 441 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 NLGN3Q9NZ94 848 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 KCMF1Q9P0J7 381 aa11.6□□□□□ -0.55
CHMP2B-201ENST00000263780 DAPL1A0PJW8 107 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 PLPP2O43688 288 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ECDO95905 644 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 CH25HO95992 272 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 RAB3BP20337 219 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 XPAP23025 273 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 RECQLP46063 649 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 CCR6P51684 374 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 CTAG1AP78358 180 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 LSM11P83369 360 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF273Q14593 569 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 TCTE1Q5JU00 501 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 PRAMEF14Q5SWL7 426 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 PRAMEF13Q5VWM6 474 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 SLC30A6Q6NXT4 461 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 FAM180BQ6P0A1 224 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 LCTLQ6UWM7 567 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 TECPR1Q7Z6L1 1165 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 COMTD1Q86VU5 262 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 SPICQ8N5J4 248 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 LILRA3Q8N6C8 439 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 OR4Q3Q8NH05 313 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ABHD4Q8TB40 342 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 PCNPQ8WW12 178 aaKnown RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ACOT11Q8WXI4 607 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 LCORQ96JN0 433 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 CMTM3Q96MX0 182 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 C20orf85Q9H1P6 137 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 FN3KQ9H479 309 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 LDAHQ9H6V9 325 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 CNIH4Q9P003 139 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 LRFN2Q9ULH4 789 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 YIPF1Q9Y548 306 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 NINQ8N4C6 2090 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 A0A1B0GUH1 482 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 PRAMEF27A3QJZ7 478 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 GRM6O15303 877 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 HOXA2O43364 376 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 NDUFA2O43678 99 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ADAMTS4O75173 837 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 SERPINA3P01011 423 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 TFP02787 698 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 GIPP09681 153 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 NDUFV2P19404 249 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 PBLDP30039 288 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 CTSOP43234 321 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 KLF9Q13886 244 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 MAPK14Q16539 360 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 LRRC73Q5JTD7 316 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 RGS7BPQ6MZT1 257 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ADCK2Q7Z695 626 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ARL14EPQ8N8R7 260 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 DTX3Q8N9I9 347 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 FAM98AQ8NCA5 519 aaKnown RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 BEST4Q8NFU0 473 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 NLGN2Q8NFZ4 835 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 OR51G2Q8NGK0 314 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 MOSPD2Q8NHP6 518 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF461Q8TAF7 563 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 RIT1Q92963 219 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 LINC00052Q96N35 136 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ZFP3Q96NJ6 502 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 TMPRSS13Q9BYE2 586 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 WDR26Q9H7D7 661 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ISG20L2Q9H9L3 353 aaKnown RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 KCNK12Q9HB15 430 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 ZCCHC3Q9NUD5 404 aaKnown RBP11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 SCML1Q9UN30 329 aa11.59□□□□□ -0.55
CHMP2B-201ENST00000263780 DOCK3Q8IZD9 2030 aa11.58□□□□□ -0.55
CHMP2B-201ENST00000263780 A0A1B0GVC2 190 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 A6NIN4 97 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 SEPT4O43236 478 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 BSGP35613 385 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 ZP1P60852 638 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 RAP2BP61225 183 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 TRA2BP62995 288 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 DGCR2P98153 550 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 MLLT1Q03111 559 aaPredicted RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 TUSC1Q2TAM9 212 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 ARL9Q6T311 187 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 HTR3DQ70Z44 454 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 MEPCEQ7L2J0 689 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 KANSL1Q7Z3B3 1105 aa11.58□□□□□ -0.56
CHMP2B-201ENST00000263780 NUDT13Q86X67 352 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms