RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PLEKHM1Q9Y4G2 1056 aa12.52□□□□□ -0.4
NEK9-201ENST00000238616 ARFGEF3Q5TH69 2177 aa12.52□□□□□ -0.4
NEK9-201ENST00000238616 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 H3BSA7 217 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 BCAS2O75934 225 aaPredicted RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 VNN1O95497 513 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 MPIG6BO95866 241 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 MT-ND2P03891 347 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 SOD2P04179 222 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 IER5LQ5T953 404 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 SFRP4Q6FHJ7 346 aaPredicted RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 TMEM59Q9BXS4 323 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 ACKR4Q9NPB9 350 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 NLE1Q9NVX2 485 aaPredicted RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 A0A1W2PQ09 198 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 PAHP00439 452 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 HBQ1P09105 142 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 ERP29P30040 261 aaKnown RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 ZNF630Q2M218 657 aaPredicted RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 KIAA0907Q7Z7F0 614 aaPredicted RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 TRIM73Q86UV7 250 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 SCRN2Q96FV2 425 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 SLC29A3Q9BZD2 475 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 OPA3Q9H6K4 179 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 PIAS3Q9Y6X2 628 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 NKX3-2P78367 333 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 STT3BQ8TCJ2 826 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 CLEC4DQ8WXI8 215 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 RBMXL1Q96E39 390 aaKnown RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 SMIM3Q9BZL3 60 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 LIN28AQ9H9Z2 209 aaKnown RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 LRRC42Q9Y546 428 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 DDX60Q8IY21 1712 aaKnown RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 PTPRUQ92729 1446 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 C12orf71A8MTZ7 269 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 TGM6O95932 706 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 SLC35A2P78381 396 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 PDLIM3Q53GG5 364 aaPredicted RBP12.52□□□□□ -0.41
NEK9-201ENST00000238616 ZNF679Q8IYX0 411 aa12.52□□□□□ -0.41
NEK9-201ENST00000238616 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 SF3B4Q15427 424 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■■■□□ 17
NEK9-201ENST00000238616 ZNF516Q92618 1163 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 TBC1D20Q96BZ9 403 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 ZNF845Q96IR2 970 aaPredicted RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 TINAGL1Q9GZM7 467 aaPredicted RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 NGBQ9NPG2 151 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 SUSD2Q9UGT4 822 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 NTSR1P30989 418 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 CLDN2P57739 230 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 NCS1P62166 190 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 SNTB2Q13425 540 aaKnown RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 LARP4Q71RC2 724 aaKnown RBP eCLIP12.51□□□□□ -0.41
NEK9-201ENST00000238616 KLHDC8AQ8IYD2 350 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 SCCPDHQ8NBX0 429 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 VRK1Q99986 396 aaPredicted RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 TMEM248Q9NWD8 314 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 COQ3Q9NZJ6 369 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 MED1Q15648 1581 aaPredicted RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 CD300LBA8K4G0 201 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 OXSR1O95747 527 aaPredicted RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 CER1O95813 267 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 PFKMP08237 780 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 SNRPD2P62316 118 aaKnown RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 GNB2P62879 340 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 ERV3-1Q14264 604 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 PRICKLE2Q7Z3G6 844 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 RDH10Q8IZV5 341 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 GTPBP8Q8N3Z3 284 aaPredicted RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 TEX26Q8N6G2 289 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 METTL25Q8N6Q8 603 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 NAT8LQ8N9F0 302 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 NR4A3Q92570 626 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 NUDT22Q9BRQ3 303 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 AGXT2Q9BYV1 514 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 HSFX1Q9UBD0 423 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 PCDHGA5Q9Y5G8 931 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 K7EPK0 472 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 PRPH2P23942 346 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 CCL11P51671 97 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 HSD17B7P56937 341 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 KCTD20Q7Z5Y7 419 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 SERPINA12Q8IW75 414 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 FAM71E2Q8N5Q1 922 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 SLC17A9Q9BYT1 436 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 RNF32Q9H0A6 362 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 CUTCQ9NTM9 273 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 DAP3P51398 398 aaKnown RBP12.51□□□□□ -0.41
NEK9-201ENST00000238616 ZXDBP98169 803 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 SFXN5Q8TD22 340 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 KIAA1191Q96A73 305 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 C3orf49Q96BT1 292 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 LMAN1LQ9HAT1 526 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 ABCA1O95477 2261 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 ZNF217O75362 1048 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 EMX2Q04743 252 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 PLA2G7Q13093 441 aa12.51□□□□□ -0.41
NEK9-201ENST00000238616 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms