RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CCNYL3P0C7X3 344 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 HOXA6P31267 233 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 SDC2P34741 201 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 HNRNPA0Q13151 305 aaKnown RBP23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 ZNF425Q6IV72 752 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 FAM131AQ6UXB0 335 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 PRICKLE2Q7Z3G6 844 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 SLC22A18ASQ8N1D0 253 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 ZNF485Q8NCK3 441 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 FAM174AQ8TBP5 190 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 TSACCQ96A04 125 aaPredicted RBP23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 PLA2G12AQ9BZM1 189 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 CACYBPQ9HB71 228 aaKnown RBP23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 ABCB9Q9NP78 766 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 GPR27Q9NS67 375 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 SLCO1B1Q9Y6L6 691 aa23.25■■□□□ 1.31
RUNDC3A-201ENST00000225441 AP3D1O14617 1153 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 SCAMP1O15126 338 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 PPM1DO15297 605 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 SRP54P61011 504 aaKnown RBP23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 ZNF628Q5EBL2 1059 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 C22orf42Q6IC83 251 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 TMEM107Q6UX40 140 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 OR52N1Q8NH53 320 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 C1GALT1C1Q96EU7 318 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 MIXL1Q9H2W2 232 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 XKR8Q9H6D3 395 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 ASB6Q9NWX5 421 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 NLGN3Q9NZ94 848 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 COLEC10Q9Y6Z7 277 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 A0A1W2PQL4 384 aaPredicted RBP23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 FAM172BPA6NC97 362 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 LIMS3P0CW19 117 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 LIMS4P0CW20 117 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 THEGLP0DJG4 465 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 BCKDHBP21953 392 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 BAK1Q16611 211 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 ALG11Q2TAA5 492 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 CRTC2Q53ET0 693 aaPredicted RBP23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 PDZK1Q5T2W1 519 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 AADACL4Q5VUY2 407 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 C16orf62Q7Z3J2 963 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 PSD4Q8NDX1 1056 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 SLC9A6Q92581 669 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 GAL3ST3Q96A11 431 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 C16orf58Q96GQ5 468 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 EGLN3Q9H6Z9 239 aa23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 MTHFD2LQ9H903 347 aaPredicted RBP23.24■■□□□ 1.31
RUNDC3A-201ENST00000225441 A0A1W2PQ09 198 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 POLR1CO15160 346 aaPredicted RBP23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 KLF4O43474 513 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 HCN1O60741 890 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 NDUFS1P28331 727 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 BDH1Q02338 343 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 CHRNEQ04844 493 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 FLYWCH1Q4VC44 716 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 TSSK4Q6SA08 328 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 SPATC1Q76KD6 591 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 RD3Q7Z3Z2 195 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 OR8D4Q8NGM9 314 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 TM9SF4Q92544 642 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 DIRAS2Q96HU8 199 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 YIPF4Q9BSR8 244 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 PRMT8Q9NR22 394 aaPredicted RBP23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 SEMA4GQ9NTN9 838 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 ZNF232Q9UNY5 417 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 POLHQ9Y253 713 aa23.23■■□□□ 1.31
RUNDC3A-201ENST00000225441 CCDC163A0A0D9SF12 145 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 GLOD5A6NK44 160 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 AKAP8O43823 692 aaKnown RBP23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 IGHA1P01876 353 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 HLA-DPB1P04440 258 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 CDH11P55287 796 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 CARTPTQ16568 116 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 FAM214AQ32MH5 1076 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 MBOAT2Q6ZWT7 520 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 RDH10Q8IZV5 341 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 NT5CQ8TCD5 201 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 KLHDC7BQ96G42 594 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 HSPA12BQ96MM6 686 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 KATNB1Q9BVA0 655 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 OR6C2Q9NZP2 312 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 C4orf51C9J302 202 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 SURF4O15260 269 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 HLA-DQB1P01920 261 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 HTR1FP30939 366 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 SLC1A3P43003 542 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 RPS15AP62244 130 aaKnown RBP23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 RPS25P62851 125 aaKnown RBP23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 RIN1Q13671 783 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 RPE65Q16518 533 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 EIPR1Q53HC9 387 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 NXNL2Q5VZ03 156 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 CDC73Q6P1J9 531 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 KLHL36Q8N4N3 616 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 OR52P1PQ8NH57 321 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 TP53INP1Q96A56 240 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 GIMAP5Q96F15 307 aa23.22■■□□□ 1.31
RUNDC3A-201ENST00000225441 TPK1Q9H3S4 243 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms