RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Adipor1Q91VH1 375 aa17.1■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Ces2cQ91WG0 561 aa17.1■□□□□ 0.33
Vti1b-201ENSMUST00000055262 NcaldQ91X97 193 aa17.1■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Lrg1Q91XL1 342 aa17.1■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Sucnr1Q99MT6 317 aa17.1■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Pex13Q9D0K1 405 aa17.1■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Brix1Q9DCA5 353 aaKnown RBP17.1■□□□□ 0.33
Vti1b-201ENSMUST00000055262 PgdQ9DCD0 483 aa17.1■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Slc9a6A1L3P4 702 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Olfr1076A2AK60 313 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Xlr5aA2BI45 236 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Gm8897L7N294 181 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 PrkcshO08795 521 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 ColqO35348 457 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Irs3O54718 495 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 BdnfP21237 249 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Nkx2-2P42586 273 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Runx1t1Q61909 577 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Klhdc10Q6PAR0 439 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 RhbgQ8BUX5 455 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Tmprss3Q8K1T0 453 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Tnfaip8l1Q8K288 186 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Olfr1411Q8VFC4 323 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Nsmce2Q91VT1 247 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Slc3a1Q91WV7 685 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Prpf19Q99KP6 504 aaKnown RBP17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Fndc8Q9D2H8 321 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Ccdc83Q9D4V3 305 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Raet1dQ9JI58 249 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Minpp1Q9Z2L6 481 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Exph5Q0VAV2 1960 aa17.09■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Urb1Q571H0 2274 aaKnown RBP17.08■□□□□ 0.33
Vti1b-201ENSMUST00000055262 Rad21l1A2AU37 552 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Gm3752A6NAT4 150 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Skint9A7TZG3 319 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 SvaE9PX96 165 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Vmn1r238E9Q373 306 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Fbxw9F8VPX2 458 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Gm10340K7N708 205 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Sh3pxd2aO89032 1124 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 P06336 421 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Hoxb4P10284 250 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 PdgfaP20033 211 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Akr1b7P21300 316 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 LhcgrP30730 700 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Hcls1P49710 486 aaKnown RBP17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Cdh5P55284 784 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Kcnk2P97438 426 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Syndig1lQ3USQ7 237 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 P4ha2Q60716 537 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Slc30a1Q60738 503 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Gngt2Q61017 69 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Gstt2Q61133 244 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 LcorQ6ZPI3 433 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Olfr1275Q7TQY8 312 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Catsper3Q80W99 395 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Tmem121Q80XA0 318 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Samd4bQ80XS6 687 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Nceh1Q8BLF1 408 aaKnown RBP17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 NarsQ8BP47 559 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Gm9938Q8C3P5 112 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 TbceQ8CIV8 524 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Clec14aQ8VCP9 459 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 PsphQ99LS3 225 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Cby3Q9CVN6 235 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Yif1bQ9CX30 311 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Exo5Q9CXP9 373 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Cep97Q9CZ62 856 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Tmem53Q9D0Z3 276 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Phf7Q9DAG9 307 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Elovl4Q9EQC4 312 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Jmjd6Q9ERI5 403 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Mocs2Q9Z223 189 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Ppp1r17Q9Z2E4 159 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Dopey2Q3UHQ6 2295 aa17.08■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Col5a1O88207 1838 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Zfp760E9QAF5 666 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Lhx8O35652 367 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 CckbrP56481 453 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Bop1P97452 732 aaKnown RBP17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Atf4Q06507 349 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 B4galnt1Q09200 533 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Alg6Q3TAE8 507 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Shisa6Q3UH99 525 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Zdhhc8Q5Y5T5 762 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Xlr3aQ60595 226 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Dnajc8Q6NZB0 253 aaKnown RBP17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 DcstampQ7TNJ0 470 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Pum2Q80U58 1066 aaKnown RBP17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 JamlQ80UL9 379 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Snx32Q80ZJ7 404 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Mettl27Q8BGM4 238 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Mtrf1lQ8BJU9 373 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Acaa2Q8BWT1 397 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Gpr22Q8BZL4 432 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Sulf2Q8CFG0 875 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Wipf1Q8K1I7 493 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 DhddsQ99KU1 333 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 B3gat1Q9CW73 334 aa17.07■□□□□ 0.32
Vti1b-201ENSMUST00000055262 Upk1aQ9D132 257 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms