RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 PTPRZ1P23471 2315 aaPredicted RBP14.37□□□□□ -0.11
UBE3A-227ENST00000638011 TGFB1I1O43294 461 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 IL33O95760 270 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 TAF10Q12962 218 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 TAF9Q16594 264 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.37□□□□□ -0.11
UBE3A-227ENST00000638011 HPSE2Q8WWQ2 592 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 SALL3Q9BXA9 1300 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 NUPL2O15504 423 aaKnown RBP14.37□□□□□ -0.11
UBE3A-227ENST00000638011 RAB11AP62491 216 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 IQCJQ1A5X6 159 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 C6orf136Q5SQH8 315 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 OR52H1Q8NGJ2 320 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 OR51Q1Q8NH59 317 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 TEPSINQ96N21 525 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 SOX17Q9H6I2 414 aaPredicted RBP14.37□□□□□ -0.11
UBE3A-227ENST00000638011 PLEKHJ1Q9NW61 149 aa14.37□□□□□ -0.11
UBE3A-227ENST00000638011 GMPR2Q9P2T1 348 aaKnown RBP14.37□□□□□ -0.11
UBE3A-227ENST00000638011 OPN1SWP03999 348 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 GABRA2P47869 451 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 NPBWR1P48145 328 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 TMEM225Q6GV28 225 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 TMEM18Q96B42 140 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 SORCS2Q96PQ0 1159 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 WRAP53Q9BUR4 548 aaKnown RBP14.36□□□□□ -0.11
UBE3A-227ENST00000638011 MRIQ9BWK5 157 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 OARD1Q9Y530 152 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 GIFP27352 417 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 KDM8Q8N371 416 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 ANGPTL6Q8NI99 470 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 GJD2Q9UKL4 321 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 SLC6A14Q9UN76 642 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 AGPAT2O15120 278 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 HMGCS1Q01581 520 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 EXOSC6Q5RKV6 272 aaKnown RBP14.36□□□□□ -0.11
UBE3A-227ENST00000638011 TMEM164Q5U3C3 297 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 M1APQ8TC57 530 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 GIMAP1Q8WWP7 306 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 ZBTB8AQ96BR9 441 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 METTL2AQ96IZ6 378 aaKnown RBP14.36□□□□□ -0.11
UBE3A-227ENST00000638011 TMEM74Q96NL1 305 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 METTL7AQ9H8H3 244 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 DKKL1Q9UK85 242 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 COPS3Q9UNS2 423 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 KPTNQ9Y664 436 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 E7ESA3 106 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 PSMB3P49720 205 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 MLLT11Q13015 90 aaPredicted RBP14.36□□□□□ -0.11
UBE3A-227ENST00000638011 GBX1Q14549 363 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 SLC10A1Q14973 349 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 ZNF678Q5SXM1 525 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 RPL22L1Q6P5R6 122 aaKnown RBP14.36□□□□□ -0.11
UBE3A-227ENST00000638011 NXPE4Q6UWF7 544 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 ASB3Q9Y575 518 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 CASD1Q96PB1 797 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 C12orf57Q99622 126 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 IFT22Q9H7X7 185 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 AGPAT4Q9NRZ5 378 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 TMEM200CA6NKL6 621 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 CD300LBA8K4G0 201 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 SAP18O00422 153 aaKnown RBP14.36□□□□□ -0.11
UBE3A-227ENST00000638011 KDELR2P33947 212 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 PSMD8P48556 350 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 CDK5R2Q13319 367 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 GUK1Q16774 197 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 ISYNA1Q9NPH2 558 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 CTPS2Q9NRF8 586 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 SLIT3O75094 1523 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 ACVR1BP36896 505 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 LRRC56Q8IYG6 542 aaPredicted RBP14.36□□□□□ -0.11
UBE3A-227ENST00000638011 RHOXF1Q8NHV9 184 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 NANOS1Q8WY41 292 aaKnown RBP14.36□□□□□ -0.11
UBE3A-227ENST00000638011 MED18Q9BUE0 208 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 MIR1-1HGQ9H1L0 117 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 GPR83Q9NYM4 423 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 A3GALT2U3KPV4 340 aa14.36□□□□□ -0.11
UBE3A-227ENST00000638011 A0A1B0GV50 99 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 MANSC4A6NHS7 340 aaPredicted RBP14.35□□□□□ -0.11
UBE3A-227ENST00000638011 GLUD1P00367 558 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 DRD2P14416 443 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 SOX2P48431 317 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 VAMP3Q15836 100 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 TFAP2CQ92754 450 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 RRAGCQ9HB90 399 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 NOX3Q9HBY0 568 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.35□□□□□ -0.11
UBE3A-227ENST00000638011 NUP98P52948 1817 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 VEGFDO43915 354 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 CLIC3O95833 236 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 RHBDL3P58872 404 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 PPP1R3AQ16821 1122 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 ENTHD1Q8IYW4 607 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 SIGLECL1Q8N7X8 197 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 SAP130Q9H0E3 1048 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 IL21RQ9HBE5 538 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 CLDN5O00501 218 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 ETV3P41162 512 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 LCN6P62502 163 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 PRKCZQ05513 592 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms