RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 FAM210AQ96ND0 272 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 C20orf27Q9GZN8 174 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 DCSTAMPQ9H295 470 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 SLAMF8Q9P0V8 285 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 KCND3Q9UK17 655 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 PEX16Q9Y5Y5 336 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 TMEM14AQ9Y6G1 99 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 ROS1P08922 2347 aa8.69□□□□□ -1.02
GGA3-223ENST00000621870 FAM172BPA6NC97 362 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 TAF4O00268 1085 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ATE1O95260 518 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 CTSLP07711 333 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 PABPC4LP0CB38 370 aaKnown RBP8.68□□□□□ -1.02
GGA3-223ENST00000621870 ICAM2P13598 275 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ST6GAL1P15907 406 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ABOP16442 354 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 GGT1P19440 569 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 HOXC8P31273 242 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 CDKN2CP42773 168 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 CCL11P51671 97 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 KCNJ10P78508 379 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SCRN3Q0VDG4 424 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 MFSD13AQ14CX5 517 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 LTB4RQ15722 352 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 Q6ZSR9 355 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ZER1Q7Z7L7 766 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 CROCCP3Q8IVE0 287 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 GID4Q8IVV7 300 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 IQCF1Q8N6M8 205 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 OR2T4Q8NH00 348 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 THAP4Q8WY91 577 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 CLCC1Q96S66 551 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 MS4A8Q9BY19 250 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ZDHHC5Q9C0B5 715 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 TMEM9BQ9NQ34 198 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 UBQLN4Q9NRR5 601 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SACM1LQ9NTJ5 587 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SPTBP11277 2137 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 IGHV3-20A0A0C4DH32 117 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SLC5A10A0PJK1 596 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 METTL21EPA6NDL7 271 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 AREL1O15033 823 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 CD46P15529 392 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ACVR1BP36896 505 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SMCO1Q147U7 214 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 MEDAGQ5VYS4 303 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 PLBD1Q6P4A8 553 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 LEG1Q6P5S2 330 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 LIX1LQ8IVB5 337 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 UEVLDQ8IX04 471 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ACBD7Q8N6N7 88 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 WDR20Q8TBZ3 569 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 DUSP19Q8WTR2 217 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 DNAJA4Q8WW22 397 aaPredicted RBP8.68□□□□□ -1.02
GGA3-223ENST00000621870 C16orf58Q96GQ5 468 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 TMEM80Q96HE8 168 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SAMD8Q96LT4 415 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 MND1Q9BWT6 205 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SERGEFQ9UGK8 458 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 MCTS1Q9ULC4 181 aaKnown RBP8.68□□□□□ -1.02
GGA3-223ENST00000621870 CBLCQ9ULV8 474 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 SLC7A7Q9UM01 511 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ATG4BQ9Y4P1 393 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 HTR3EA5X5Y0 456 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 METTL12A8MUP2 240 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 OR7A17O14581 309 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 CDRT1O95170 752 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 NDUFB2O95178 105 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ALDOCP09972 364 aaKnown RBP8.68□□□□□ -1.02
GGA3-223ENST00000621870 TRA2BP62995 288 aaKnown RBP8.68□□□□□ -1.02
GGA3-223ENST00000621870 SELENOWP63302 87 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 HTR4Q13639 388 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 OR7A5Q15622 319 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 RPL13AP3Q6NVV1 102 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 HACD2Q6Y1H2 254 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ASRGL1Q7L266 308 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 KIAA0907Q7Z7F0 614 aaPredicted RBP8.68□□□□□ -1.02
GGA3-223ENST00000621870 SNX29P2Q8IUI4 249 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ARMC10Q8N2F6 343 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 ZNF619Q8N2I2 560 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 GALNT6Q8NCL4 622 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 GTF2H4Q92759 462 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 LYSMD1Q96S90 227 aa8.68□□□□□ -1.02
GGA3-223ENST00000621870 FOXE1O00358 373 aaPredicted RBP8.67□□□□□ -1.02
GGA3-223ENST00000621870 ELK4P28324 431 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 TGFBR2P37173 567 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 POU3F4P49335 361 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 EPHA4P54764 986 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 RAB38P57729 211 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 AP3S2P59780 193 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 E2F1Q01094 437 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 MVKQ03426 396 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 PIGFQ07326 219 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 DPTQ07507 201 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 MAP4K2Q12851 820 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 EFR3AQ14156 821 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 LRIF1Q5T3J3 769 aa8.67□□□□□ -1.02
GGA3-223ENST00000621870 ASB18Q6ZVZ8 466 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms