RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 FKBP10Q96AY3 582 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 BIRC7Q96CA5 298 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ZHX1-C8orf76Q96EF9 292 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 AKR1E2Q96JD6 320 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 GLT1D1Q96MS3 346 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 RSG1Q9BU20 258 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 KLHL31Q9H511 634 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 PPP1R3EQ9H7J1 279 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 CPNE5Q9HCH3 593 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ABCB9Q9NP78 766 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ADARB2Q9NS39 739 aaKnown RBP3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 RHCGQ9UBD6 479 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 XPR1Q9UBH6 696 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 KCNJ14Q9UNX9 436 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 WASF3Q9UPY6 502 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 IRAK3Q9Y616 596 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 CEPT1Q9Y6K0 416 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 SF3B1O75533 1304 aaKnown RBP eCLIP3.81□□□□□ -1.82e-6■■■■■ 59.2
UBE2D3-233ENST00000618836 A0A1B0GV72 72 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 FAM237BA0A1B0GVD1 139 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 FAM187AA6NFU0 413 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 H3BN98 237 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF208O43345 1280 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 PSTPIP1O43586 416 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 SNAI2O43623 268 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 RGS10O43665 173 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 GH1P01241 217 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 FTLP02792 175 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 SERPINE2P07093 398 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 C8BP07358 591 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 DRD2P14416 443 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 CEBPBP17676 345 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 GZMHP20718 246 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ZP3P21754 424 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 MMP8P22894 467 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 MMP12P39900 470 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 NR4A2P43354 598 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ASPAP45381 313 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 MMP13P45452 471 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 WNT3P56703 355 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 OGDHQ02218 1023 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 TNP2Q05952 138 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 RBBP4Q09028 425 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 FOXE3Q13461 319 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 MAP1SQ66K74 1059 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF544Q6NX49 715 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 XKRXQ6PP77 449 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 DPY19L2P2Q6ZN68 376 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 RBM44Q6ZP01 1051 aaKnown RBP3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 RRM2BQ7LG56 351 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 IRF2BP1Q8IU81 584 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 CLIP4Q8N3C7 705 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 TMEM116Q8NCL8 245 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 SEMA6DQ8NFY4 1073 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 OR4D6Q8NGJ1 314 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 NUBPLQ8TB37 319 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 NETO1Q8TDF5 533 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 C11orf40Q8WZ69 217 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 DAZLQ92904 295 aaKnown RBP3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 RNF170Q96K19 258 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 MAGEB18Q96M61 343 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 PNKPQ96T60 521 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 CNN2Q99439 309 aaKnown RBP3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ERVK-6Q9BXR3 956 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 BHLHE41Q9C0J9 482 aaPredicted RBP3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 NEUROG2Q9H2A3 272 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 DCLRE1BQ9H816 532 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 ZMAT4Q9H898 229 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 CALHM2Q9HA72 323 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 WDR41Q9HAD4 459 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 FZD3Q9NPG1 666 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 SPHK1Q9NYA1 384 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 USE1Q9NZ43 259 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 NFU1Q9UMS0 254 aa3.81□□□□□ -1.8
UBE2D3-233ENST00000618836 NPEPPSL1A6NEC2 478 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 EIF4E1BA6NMX2 242 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 A8MUA0 341 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 WWP2O00308 870 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TM4SF5O14894 197 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 DNPH1O43598 174 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TDP2O95551 362 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TSPAN13O95857 204 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 PAK4O96013 591 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 IFNA5P01569 189 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 ITGB2P05107 769 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 ICAM1P05362 532 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TFAP2AP05549 437 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 FOLR1P15328 257 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 EFNA1P20827 205 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 COMTP21964 271 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 ACHEP22303 614 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 NR4A1P22736 598 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 CASP1P29466 404 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 RPS19P39019 145 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 MRPS9P82933 396 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 TLE1Q04724 770 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 CKAP4Q07065 602 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 CCDC6Q16204 474 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 AMZ1Q400G9 498 aa3.8□□□□□ -1.8
UBE2D3-233ENST00000618836 XKR7Q5GH72 579 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms