RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 FCMRO60667 390 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 PGM3O95394 542 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 WDPCPO95876 746 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 CHRM4P08173 479 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 TCN1P20061 433 aaPredicted RBP13.53□□□□□ -0.24
CD48-203ENST00000613788 ME2P23368 584 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 FBXW4P57775 412 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 CHRNEQ04844 493 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 GPR68Q15743 365 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 MAPK11Q15759 364 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 FLYWCH1Q4VC44 716 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 IGFL2Q6UWQ7 119 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 ASRGL1Q7L266 308 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 GALNT10Q86SR1 603 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 KRT73Q86Y46 540 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 ZNF619Q8N2I2 560 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 FBXW8Q8N3Y1 598 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 FAM13CQ8NE31 585 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 TM9SF4Q92544 642 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 HAS2Q92819 552 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 EXTL1Q92935 676 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 ZNF607Q96SK3 696 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 SECISBP2Q96T21 854 aaKnown RBP13.53□□□□□ -0.24
CD48-203ENST00000613788 SLC38A1Q9H2H9 487 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 PRORYQ9H606 182 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 TRIM45Q9H8W5 580 aaPredicted RBP13.53□□□□□ -0.24
CD48-203ENST00000613788 CACYBPQ9HB71 228 aaKnown RBP13.53□□□□□ -0.24
CD48-203ENST00000613788 UBQLN4Q9NRR5 601 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 MKLN1Q9UL63 735 aa13.53□□□□□ -0.24
CD48-203ENST00000613788 IGF2RP11717 2491 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 UGT2B11O75310 529 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 PDE9AO76083 593 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 UTS2O95399 124 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 CYP4B1P13584 511 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 ETS2P15036 469 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 HPGDP15428 266 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 CD96P40200 585 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 CLK3P49761 638 aaKnown RBP13.52□□□□□ -0.25
CD48-203ENST00000613788 ATP12AP54707 1039 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 POLE2P56282 527 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 BNIP2Q12982 314 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 TUBA3CQ13748 450 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 TYW3Q6IPR3 259 aaKnown RBP13.52□□□□□ -0.25
CD48-203ENST00000613788 TUBA3EQ6PEY2 450 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 FRRS1Q6ZNA5 592 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 RTL4Q6ZR62 310 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 PATL1Q86TB9 770 aaKnown RBP13.52□□□□□ -0.25
CD48-203ENST00000613788 CYP4Z2PQ8N1L4 340 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 ZNF527Q8NB42 609 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 GOLM1Q8NBJ4 401 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 OR5M3Q8NGP4 307 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 OIT3Q8WWZ8 545 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 SPATA5L1Q9BVQ7 753 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 RUBCNLQ9H714 662 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 LRFN1Q9P244 771 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.25
CD48-203ENST00000613788 USP22Q9UPT9 525 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 PCDHGA10Q9Y5H3 936 aa13.52□□□□□ -0.25
CD48-203ENST00000613788 OR5H15A6NDH6 313 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 KIAA0513O60268 411 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 SERPINB7O75635 380 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 PDE5AO76074 875 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 TBXA2RP21731 343 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 DCTP40126 519 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 ST13P50502 369 aaKnown RBP13.51□□□□□ -0.25
CD48-203ENST00000613788 ARG2P78540 354 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 ZNF468Q5VIY5 522 aaPredicted RBP13.51□□□□□ -0.25
CD48-203ENST00000613788 SLC22A10Q63ZE4 541 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 PGM2L1Q6PCE3 622 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 ZAR1Q86SH2 424 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 PTRH1Q86Y79 214 aaKnown RBP13.51□□□□□ -0.25
CD48-203ENST00000613788 HPS6Q86YV9 775 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 PEX5LQ8IYB4 626 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 FAM156AQ8NDB6 213 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 SPPL2AQ8TCT8 520 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 HGDQ93099 445 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 CLPTM1LQ96KA5 538 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 CNTNAP3BQ96NU0 1288 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 ARHGAP9Q9BRR9 750 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 CNTNAP3Q9BZ76 1288 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 MUC13Q9H3R2 512 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 ANKRD10Q9NXR5 420 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 PLA2G3Q9NZ20 509 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 CNIH4Q9P003 139 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 SUCOQ9UBS9 1254 aaKnown RBP13.51□□□□□ -0.25
CD48-203ENST00000613788 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 ZNF232Q9UNY5 417 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 MED13Q9UHV7 2174 aa13.51□□□□□ -0.25
CD48-203ENST00000613788 ERICH4A6NGS2 130 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 CXCR6O00574 342 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 SCDO00767 359 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 STAMBPO95630 424 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 IFNA14P01570 189 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 NGFRP08138 427 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 GGT1P19440 569 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 KDELR2P33947 212 aa13.5□□□□□ -0.25
CD48-203ENST00000613788 MSX2P35548 267 aaPredicted RBP13.5□□□□□ -0.25
CD48-203ENST00000613788 PCBP3P57721 371 aaKnown RBP13.5□□□□□ -0.25
CD48-203ENST00000613788 TRIM25Q14258 630 aaKnown RBP13.5□□□□□ -0.25
CD48-203ENST00000613788 FXNQ16595 210 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms