RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 LRTM1Q9HBL6 345 aa11.12□□□□□ -0.63
HLA-F-230ENST00000606273 SLCO1B3Q9NPD5 702 aa11.12□□□□□ -0.63
HLA-F-230ENST00000606273 THAP1Q9NVV9 213 aa11.12□□□□□ -0.63
HLA-F-230ENST00000606273 NMRK1Q9NWW6 199 aa11.12□□□□□ -0.63
HLA-F-230ENST00000606273 ZNF629Q9UEG4 869 aaPredicted RBP11.12□□□□□ -0.63
HLA-F-230ENST00000606273 MARCOQ9UEW3 520 aaPredicted RBP11.12□□□□□ -0.63
HLA-F-230ENST00000606273 PHF11Q9UIL8 331 aa11.12□□□□□ -0.63
HLA-F-230ENST00000606273 MCM8Q9UJA3 840 aa11.12□□□□□ -0.63
HLA-F-230ENST00000606273 CES1P1Q9UKY3 287 aa11.12□□□□□ -0.63
HLA-F-230ENST00000606273 EXO1Q9UQ84 846 aaKnown RBP11.12□□□□□ -0.63
HLA-F-230ENST00000606273 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.12□□□□□ -0.63
HLA-F-230ENST00000606273 MMACHCQ9Y4U1 282 aa11.12□□□□□ -0.63
HLA-F-230ENST00000606273 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 ACOT7O00154 380 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 KLF11O14901 512 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PHF1O43189 567 aaPredicted RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 SUSD5O60279 629 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PEX11AO75192 247 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 SEC22BO75396 215 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 CHEK2O96017 543 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PGRP06401 933 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 IL3P08700 152 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 ANXA4P09525 319 aaPredicted RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 NR2F6P10588 404 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 KITP10721 976 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 HK2P52789 917 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 RPL38P63173 70 aaKnown RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 IGLV3-21P80748 117 aaPredicted RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 GALNTL6Q49A17 601 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 SPIN4Q56A73 249 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 LCE4AQ5TA78 99 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 HEPHL1Q6MZM0 1159 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 NOXRED1Q6NXP6 359 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PAGE2Q7Z2X7 111 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 SLC22A16Q86VW1 577 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 MRPL41Q8IXM3 137 aaKnown RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 TMEM251Q8N6I4 163 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PSD4Q8NDX1 1056 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 NFAM1Q8NET5 270 aaPredicted RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 OR2M7Q8NG81 312 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 RAB3IL1Q8TBN0 382 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PPWD1Q96BP3 646 aaKnown RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 SARAFQ96BY9 339 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PERPQ96FX8 193 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 ALOXE3Q9BYJ1 711 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 NUF2Q9BZD4 464 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 ACBD3Q9H3P7 528 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PNO1Q9NRX1 252 aaKnown RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 INTS9Q9NV88 658 aaKnown RBP11.11□□□□□ -0.63
HLA-F-230ENST00000606273 C1orf109Q9NX04 203 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 MS4A12Q9NXJ0 267 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 PCDHA9Q9Y5H5 950 aa11.11□□□□□ -0.63
HLA-F-230ENST00000606273 GNG14A0A1W2PPG7 69 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 ZNF195O14628 629 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 ATP8B1O43520 1251 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 RGS14O43566 566 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 ITGA10O75578 1167 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 SDC1P18827 310 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 CEACAM8P31997 349 aaPredicted RBP11.1□□□□□ -0.63
HLA-F-230ENST00000606273 BUD31P41223 144 aaPredicted RBP11.1□□□□□ -0.63
HLA-F-230ENST00000606273 MAGEA5P43359 124 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 C6orf136Q5SQH8 315 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 ATG16L1Q676U5 607 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 SLC48A1Q6P1K1 146 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 HIPK1Q86Z02 1210 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 WDR75Q8IWA0 830 aaKnown RBP11.1□□□□□ -0.63
HLA-F-230ENST00000606273 FAM109AQ8N4B1 249 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 ZNF321PQ8N8H1 164 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 TNIP2Q8NFZ5 429 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 CLHC1Q8NHS4 586 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 PTPMT1Q8WUK0 201 aaPredicted RBP11.1□□□□□ -0.63
HLA-F-230ENST00000606273 CKAP2Q8WWK9 683 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 SMPDL3BQ92485 455 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 SLAMF8Q9P0V8 285 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 BAIAP2L1Q9UHR4 511 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 ZNF223Q9UK11 482 aaPredicted RBP11.1□□□□□ -0.63
HLA-F-230ENST00000606273 MRPS33Q9Y291 106 aaKnown RBP11.1□□□□□ -0.63
HLA-F-230ENST00000606273 SPACA6W5XKT8 324 aa11.1□□□□□ -0.63
HLA-F-230ENST00000606273 HRKO00198 91 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 MYO1DO94832 1006 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 GPR75O95800 540 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 ALDH9A1P49189 494 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 MAN2A2P49641 1150 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 GPR143P51810 404 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 TRA2BP62995 288 aaKnown RBP11.09□□□□□ -0.63
HLA-F-230ENST00000606273 SORDQ00796 357 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 STX4Q12846 297 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 SLC10A1Q14973 349 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 FAM71E1Q6IPT2 247 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 CDC26Q8NHZ8 85 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 TANKQ92844 425 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 GFM2Q969S9 779 aaKnown RBP11.09□□□□□ -0.63
HLA-F-230ENST00000606273 TUBGCP3Q96CW5 907 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 DACH2Q96NX9 599 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 C1orf50Q9BV19 199 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 WDR55Q9H6Y2 383 aaPredicted RBP11.09□□□□□ -0.63
HLA-F-230ENST00000606273 VTI1BQ9UEU0 232 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 ERVK-11Q9UQG0 969 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 PCDHGB3Q9Y5G1 929 aa11.09□□□□□ -0.63
HLA-F-230ENST00000606273 NPFFR2Q9Y5X5 522 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms