RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 Q9UFV3 132 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 GIMAP2Q9UG22 337 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 ARHGAP21Q5T5U3 1957 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 C2orf72A6NCS6 295 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 ENO4A6NNW6 628 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 DVL2O14641 736 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 ITM2AO43736 263 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 SCO2O43819 266 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 IL2RAP01589 272 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 BGNP21810 368 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 CHMP24386 653 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 DPP4P27487 766 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 MAP3K8P41279 467 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 PRKAG1P54619 331 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 CLDN8P56748 225 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 TRIM42Q8IWZ5 723 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 OR7A2PQ8NGA2 310 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 PSMA8Q8TAA3 256 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 ZPLD1Q8TCW7 415 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 SFXN5Q8TD22 340 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 SLC9A6Q92581 669 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 FAM120BQ96EK7 910 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 C14orf79Q96F83 325 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 RMND5BQ96G75 393 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 WDYHV1Q96HA8 205 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 SFXN2Q96NB2 322 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 STACQ99469 402 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 PAIP2Q9BPZ3 127 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 TREX2Q9BQ50 279 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 G6PC3Q9BUM1 346 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 CALHM2Q9HA72 323 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 DUSP22Q9NRW4 184 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 NKIRAS1Q9NYS0 192 aa16.13■□□□□ 0.17
SHKBP1-204ENST00000594862 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 TMEM120BA0PK00 339 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 H0Y3Z8 333 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 C19orf84I3L1E1 186 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 TOXO94900 526 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 LAMP1P11279 417 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 MSX1P28360 303 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 RFX3P48380 749 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 DIO3P55073 304 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 C17orf67Q0P5P2 114 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 SPDYE7PQ495Y7 208 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 MEX3BQ6ZN04 569 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 RIMKLAQ8IXN7 391 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 COX18Q8N8Q8 333 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 ANKRD42Q8N9B4 389 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 FADS6Q8N9I5 356 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 GOT1L1Q8NHS2 421 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 GIMAP5Q96F15 307 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 ZFP3Q96NJ6 502 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 SORT1Q99523 831 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 DUSP26Q9BV47 211 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 ZNF629Q9UEG4 869 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 FBXL2Q9UKC9 423 aa16.12■□□□□ 0.17
SHKBP1-204ENST00000594862 MBD3L4A6NDZ8 208 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 MBD3L3A6NE82 208 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 MBD3L5A6NJ08 208 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 UTS2O95399 124 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 FREM3P0C091 2139 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 G6PDP11413 515 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 IGFBP2P18065 325 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 CEACAM8P31997 349 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 ADH7P40394 386 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 KIR3DL1P43629 444 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 GFRA1P56159 465 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 TFF3Q07654 80 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 BST1Q10588 318 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 MPP2Q14168 576 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 BCL2A1Q16548 175 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 DPY19L1Q2PZI1 675 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 GLYR1Q49A26 553 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 BEND6Q5SZJ8 279 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 CES4AQ5XG92 561 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 ATG16L1Q676U5 607 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 WDR53Q7Z5U6 358 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 MISPQ8IVT2 679 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 OR2M3Q8NG83 312 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 MBD3L2Q8NHZ7 208 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 PIK3R3Q92569 461 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 JADE3Q92613 823 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 TM9SF2Q99805 663 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 BTBD2Q9BX70 525 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 TRIM8Q9BZR9 551 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 ACBD3Q9H3P7 528 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 AKTIPQ9H8T0 292 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 SIRT3Q9NTG7 399 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 FAF1Q9UNN5 650 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 SNX8Q9Y5X2 465 aa16.11■□□□□ 0.17
SHKBP1-204ENST00000594862 APCP25054 2843 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 IGLV3-32A0A0A0MS00 114 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 NKX2-6A6NCS4 301 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 TRPC5OSA6NMA1 111 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 ALG1L2C9J202 215 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 SLCO1B7G3V0H7 640 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 CFLARO15519 480 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 HMGN2P05204 90 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 SNRPB2P08579 225 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms