RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 GK2Q14410 553 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 FGFBP1Q14512 234 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SMCO1Q147U7 214 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MLC1Q15049 377 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CCL14Q16627 93 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CLLU1OSQ5K130 101 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ENTPD8Q5MY95 495 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 Q6ZVU0 165 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 BTN2A1Q7KYR7 527 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 NUP43Q8NFH3 380 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 OR2T35Q8NGX2 323 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.33□□□□□ -1.885e-48■□□□□ 10.8
VMP1-216ENST00000592790 SH3RF2Q8TEC5 729 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SMAP2Q8WU79 429 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 SLC38A5Q8WUX1 472 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RAB8BQ92930 207 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 NEIL2Q969S2 332 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 COL26A1Q96A83 441 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GIMAP5Q96F15 307 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 IGSF21Q96ID5 467 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ART5Q96L15 291 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ASB16Q96NS5 453 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MS4A4EQ96PG1 132 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 HDHD5Q9BXW7 423 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CARS2Q9HA77 564 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 BCL2L10Q9HD36 194 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 EQTNQ9NQ60 294 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 C1GALT1Q9NS00 363 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 TMEM184CQ9NVA4 438 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 DEC1Q9P2X7 70 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MGAT4CQ9UBM8 478 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SLCO3A1Q9UIG8 710 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 COLQQ9Y215 455 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZDBF2Q9HCK1 2354 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 LOC285556D6RIA3 1793 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 IGLV3-16A0A075B6K0 115 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 KCNE1BA0A087WTH5 132 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ARPC4-TTLL3A0A0A6YYG9 625 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 A0A0B4J203 849 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TRBV4-1A0A0J9YWV2 114 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 A0A1B0GTL3 188 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GXYLT2A0PJZ3 443 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CD8B2A6NJW9 211 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 NUDT19A8MXV4 375 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 DISC1C4P0D8 188 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 LEFTY2O00292 366 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ERI3O43414 337 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 SC5DO75845 299 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RGS11O94810 467 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RAF1P04049 648 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 IFNA6P05013 189 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 S100A6P06703 90 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TPOP07202 933 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CHRM5P08912 532 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 UBBP0CG47 229 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 UBCP0CG48 685 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 PET100P0DJ07 73 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GAAP10253 952 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CD8BP10966 210 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 POU3F3P20264 500 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 ALAS2P22557 587 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PREPP48147 710 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ETV1P50549 477 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ART1P52961 327 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CASP9P55211 416 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 RPS27AP62979 156 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 UBA52P62987 128 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 SHC2P98077 582 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PDE7AQ13946 482 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 LASP1Q14847 261 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 LINC01559Q495D7 138 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SYT14P1Q58G82 188 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CLLU1Q5K131 121 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TMEM69Q5SWH9 247 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZBTB37Q5TC79 503 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZCCHC12Q6PEW1 402 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 FIP1L1Q6UN15 594 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 GRAMD2AQ8IUY3 354 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 TIGD4Q8IY51 512 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 KLHDC8AQ8IYD2 350 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CAMKVQ8NCB2 501 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 GALNT11Q8NCW6 608 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 THAP6Q8TBB0 222 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 LKAAEAR1Q8TD35 194 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 APH1BQ8WW43 257 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SPRYD4Q8WW59 207 aaPredicted RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 CNOT9Q92600 299 aaKnown RBP3.33□□□□□ -1.88
VMP1-216ENST00000592790 KAT2AQ92830 837 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ZDHHC16Q969W1 377 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CLIP3Q96DZ5 547 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SLC41A3Q96GZ6 507 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 ST6GAL2Q96JF0 529 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 SERINC2Q96SA4 455 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MNTQ99583 582 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CDC6Q99741 560 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 MARVELD1Q9BSK0 173 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 HHATLQ9HCP6 504 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 CTPS2Q9NRF8 586 aa3.33□□□□□ -1.88
VMP1-216ENST00000592790 PPP1R14DQ9NXH3 145 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms