RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ASRGL1Q7L266 308 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 GALNT10Q86SR1 603 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 KRT73Q86Y46 540 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 ZNF619Q8N2I2 560 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 FBXW8Q8N3Y1 598 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 FAM13CQ8NE31 585 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 TMCO6Q96DC7 493 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 ZNF607Q96SK3 696 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 TREX2Q9BQ50 279 aaPredicted RBP16.86■□□□□ 0.29
RFFL-211ENST00000584541 TRIM45Q9H8W5 580 aaPredicted RBP16.86■□□□□ 0.29
RFFL-211ENST00000584541 BCL2L10Q9HD36 194 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 USP22Q9UPT9 525 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 PCDHGA9Q9Y5G4 932 aaKnown RBP16.86■□□□□ 0.29
RFFL-211ENST00000584541 CACNA1GO43497 2377 aa16.86■□□□□ 0.29
RFFL-211ENST00000584541 PDE5AO76074 875 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 PGM3O95394 542 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 HPGDP15428 266 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 FBXW4P57775 412 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 CHRNEQ04844 493 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 ZNF791Q3KP31 576 aaPredicted RBP16.85■□□□□ 0.29
RFFL-211ENST00000584541 TYW3Q6IPR3 259 aaKnown RBP16.85■□□□□ 0.29
RFFL-211ENST00000584541 LYPD8Q6UX82 237 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 FRRS1Q6ZNA5 592 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 RTL4Q6ZR62 310 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 CYP4Z2PQ8N1L4 340 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 ZNF527Q8NB42 609 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 FAM156AQ8NDB6 213 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 OR5M3Q8NGP4 307 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 SPPL2AQ8TCT8 520 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 TM9SF4Q92544 642 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 TTC9Q92623 222 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 CLPTM1LQ96KA5 538 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 SGCZQ96LD1 299 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 SPATA5L1Q9BVQ7 753 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 RNF32Q9H0A6 362 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 SAP130Q9H0E3 1048 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 SLC38A1Q9H2H9 487 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 RUBCNLQ9H714 662 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 MTHFD2LQ9H903 347 aaPredicted RBP16.85■□□□□ 0.29
RFFL-211ENST00000584541 FBXO34Q9NWN3 711 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 GMPR2Q9P2T1 348 aaKnown RBP16.85■□□□□ 0.29
RFFL-211ENST00000584541 MKLN1Q9UL63 735 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 PCDHGA10Q9Y5H3 936 aa16.85■□□□□ 0.29
RFFL-211ENST00000584541 ASPMQ8IZT6 3477 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 CXCR6O00574 342 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 KIAA0513O60268 411 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 FCMRO60667 390 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 UGT2B11O75310 529 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 SERPINB7O75635 380 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 UTS2O95399 124 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 WDPCPO95876 746 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 CYP4B1P13584 511 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 ETS2P15036 469 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 AQP1P29972 269 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 CLK3P49761 638 aaKnown RBP16.84■□□□□ 0.29
RFFL-211ENST00000584541 POLE2P56282 527 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 ARG2P78540 354 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 MAPK11Q15759 364 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 RPS26P11Q5JNZ5 115 aaPredicted RBP16.84■□□□□ 0.29
RFFL-211ENST00000584541 PATL1Q86TB9 770 aaKnown RBP16.84■□□□□ 0.29
RFFL-211ENST00000584541 HPS6Q86YV9 775 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 PEX5LQ8IYB4 626 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 ULK2Q8IYT8 1036 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 OIT3Q8WWZ8 545 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 FIG4Q92562 907 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 EXTL1Q92935 676 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 SMAD5Q99717 465 aaKnown RBP16.84■□□□□ 0.29
RFFL-211ENST00000584541 ARHGAP9Q9BRR9 750 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 MUC13Q9H3R2 512 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 UBQLN4Q9NRR5 601 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 ANKRD10Q9NXR5 420 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 LRFN1Q9P244 771 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 SUCOQ9UBS9 1254 aaKnown RBP16.84■□□□□ 0.29
RFFL-211ENST00000584541 EGFL7Q9UHF1 273 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 MAGEL2Q9UJ55 1249 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 PCDHGB7Q9Y5F8 929 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 EPG5Q9HCE0 2579 aa16.84■□□□□ 0.29
RFFL-211ENST00000584541 OR5H15A6NDH6 313 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 SCDO00767 359 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 ICOSLGO75144 302 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 IFNA14P01570 189 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 GGT1P19440 569 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 DCTP40126 519 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 ST13P50502 369 aaKnown RBP16.83■□□□□ 0.28
RFFL-211ENST00000584541 ATP12AP54707 1039 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 TUBA3CQ13748 450 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 FRYQ5TBA9 3013 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 AP1ARQ63HQ0 302 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 GLYATQ6IB77 296 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 TUBA3EQ6PEY2 450 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 CCDC80Q76M96 950 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 OLIG3Q7RTU3 272 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 ZAR1Q86SH2 424 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 PTRH1Q86Y79 214 aaKnown RBP16.83■□□□□ 0.28
RFFL-211ENST00000584541 GOLM1Q8NBJ4 401 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 SLC26A7Q8TE54 656 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 HAS2Q92819 552 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 HGDQ93099 445 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 FAM162AQ96A26 154 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 CCDC124Q96CT7 223 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms