RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 CLN3Q13286 438 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 ATP1A4Q13733 1029 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 DECR1Q16698 335 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.75■□□□□ 0.27
NDEL1-217ENST00000583683 FAM98BQ52LJ0 330 aaKnown RBP16.75■□□□□ 0.27
NDEL1-217ENST00000583683 PAPD5Q8NDF8 572 aaKnown RBP16.75■□□□□ 0.27
NDEL1-217ENST00000583683 EFHD2Q96C19 240 aaPredicted RBP16.75■□□□□ 0.27
NDEL1-217ENST00000583683 SLC47A1Q96FL8 570 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 SPATA5L1Q9BVQ7 753 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 DEFB126Q9BYW3 111 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 ARMC1Q9NVT9 282 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 WDR70Q9NW82 654 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 MYOTQ9UBF9 498 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 KCNE5Q9UJ90 142 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 LRRC42Q9Y546 428 aa16.75■□□□□ 0.27
NDEL1-217ENST00000583683 NPIPA5A0A0B4J1W7 369 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 CENPVL1A0A0U1RR11 272 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 AGAP5A6NIR3 686 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 NPIPA7E9PJI5 369 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 PEX12O00623 359 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 TPST1O60507 370 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 IL33O95760 270 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 SEMG1P04279 462 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 ALPPP05187 535 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 PABPC4LP0CB38 370 aaKnown RBP16.74■□□□□ 0.27
NDEL1-217ENST00000583683 NPIPA8P0DM63 369 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 RAP2AP10114 183 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 ICAM2P13598 275 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 ATP6V1C1P21283 382 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 RPS4Y1P22090 263 aaKnown RBP16.74■□□□□ 0.27
NDEL1-217ENST00000583683 PLA2G5P39877 138 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 KCNJ5P48544 419 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 KCNJ10P78508 379 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 Q0VFX4 171 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 MAPK14Q16539 360 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 FLYWCH1Q4VC44 716 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 TBCELQ5QJ74 424 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 PRR22Q8IZ63 422 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 GPR32P1Q8NGA4 272 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 SPPL2AQ8TCT8 520 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 RASSF5Q8WWW0 418 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 LZICQ8WZA0 190 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 DIO2Q92813 273 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 PMM1Q92871 262 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 EFHD1Q9BUP0 239 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 MAGIXQ9H6Y5 334 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 ANGPTL2Q9UKU9 493 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 MSRB2Q9Y3D2 182 aa16.74■□□□□ 0.27
NDEL1-217ENST00000583683 WWP2O00308 870 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 ZNF354AO60765 605 aaPredicted RBP16.73■□□□□ 0.27
NDEL1-217ENST00000583683 UGT2B17O75795 530 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 PSPHP78330 225 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 CHRNB3Q05901 458 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 IRAK1BP1Q5VVH5 260 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 TCTN3Q6NUS6 607 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 FKBP9P1Q75LS8 142 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 VRK2Q86Y07 508 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 PEX5LQ8IYB4 626 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 SLC34A3Q8N130 599 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 OR52P1PQ8NH57 321 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 IP6K3Q96PC2 410 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 RNPEPL1Q9HAU8 725 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 NKX1-2Q9UD57 310 aaPredicted RBP16.73■□□□□ 0.27
NDEL1-217ENST00000583683 MRTO4Q9UKD2 239 aaKnown RBP16.73■□□□□ 0.27
NDEL1-217ENST00000583683 DOCK10Q96BY6 2186 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 ZFHX4Q86UP3 3567 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 NPIPB9F8W1W9 429 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 TSPAN2O60636 221 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 MT-ND1P03886 318 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 FESP07332 822 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 ITGAMP11215 1152 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 NRG3P56975 720 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 PLCXD2Q0VAA5 305 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 ZNF311Q5JNZ3 666 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 COMTD1Q86VU5 262 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 OMA1Q96E52 524 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 ADOQ96SZ5 270 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 CHID1Q9BWS9 393 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 BAG5Q9UL15 447 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 IFT52Q9Y366 437 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 CHST2Q9Y4C5 530 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 PCDHGA10Q9Y5H3 936 aa16.73■□□□□ 0.27
NDEL1-217ENST00000583683 CFAP47Q6ZTR5 3102 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 NADKO95544 446 aaPredicted RBP16.72■□□□□ 0.27
NDEL1-217ENST00000583683 EPPINO95925 133 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 THBS1P07996 1170 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 IL7RP16871 459 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 TNFRSF1BP20333 461 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 PSMD4P55036 377 aaKnown RBP16.72■□□□□ 0.27
NDEL1-217ENST00000583683 OR4C3Q8NH37 302 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 APOBEC4Q8WW27 367 aaKnown RBP16.72■□□□□ 0.27
NDEL1-217ENST00000583683 ZNF354BQ96LW1 612 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 PINK1Q9BXM7 581 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 IL1RAPQ9NPH3 570 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 STX18Q9P2W9 335 aaKnown RBP16.72■□□□□ 0.27
NDEL1-217ENST00000583683 ZNF443Q9Y2A4 671 aaPredicted RBP16.72■□□□□ 0.27
NDEL1-217ENST00000583683 SH3GLB1Q9Y371 365 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 NPFFR2Q9Y5X5 522 aa16.72■□□□□ 0.27
NDEL1-217ENST00000583683 PRAMEF25A6NGN4 478 aa16.71■□□□□ 0.27
NDEL1-217ENST00000583683 CLDN24A6NM45 220 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms