RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 HMGN4O00479 90 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 HNRNPCL1O60812 293 aaKnown RBP14.75□□□□□ -0.05
USB1-215ENST00000569252 IL33O95760 270 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 GPX2P18283 190 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 GNLYP22749 145 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 SLC6A2P23975 617 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 LCN1P31025 176 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 MAN2A2P49641 1150 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 MTPNP58546 118 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 PSME3P61289 254 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 OR1C1Q15619 314 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 NTRK2Q16620 822 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 SPINK14Q6IE38 97 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 IGFL2Q6UWQ7 119 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 IGFL3Q6UXB1 125 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 MSRB3Q8IXL7 192 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 ZNF527Q8NB42 609 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 EFHD2Q96C19 240 aaPredicted RBP14.75□□□□□ -0.05
USB1-215ENST00000569252 CPPED1Q9BRF8 314 aaPredicted RBP14.75□□□□□ -0.05
USB1-215ENST00000569252 SLC39A3Q9BRY0 314 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 SPATA9Q9BWV2 254 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 ADA2Q9NZK5 511 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 CNIH4Q9P003 139 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 ITPR2Q14571 2701 aa14.75□□□□□ -0.05
USB1-215ENST00000569252 TRAV17A0A0B4J275 112 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 A1L4Q6 167 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 GMNNO75496 209 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 UBOX5O94941 541 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 NADKO95544 446 aaPredicted RBP14.74□□□□□ -0.05
USB1-215ENST00000569252 ST13P50502 369 aaKnown RBP14.74□□□□□ -0.05
USB1-215ENST00000569252 CRISP3P54108 245 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 FBXW4P57775 412 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 ZNF791Q3KP31 576 aaPredicted RBP14.74□□□□□ -0.05
USB1-215ENST00000569252 FLYWCH1Q4VC44 716 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 CCDC121Q6ZUS5 278 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 SERPINA11Q86U17 422 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 SLC30A8Q8IWU4 369 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 METTL25Q8N6Q8 603 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 GOLM1Q8NBJ4 401 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 TMEM178AQ8NBL3 297 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 CHDHQ8NE62 594 aaPredicted RBP14.74□□□□□ -0.05
USB1-215ENST00000569252 TNIP2Q8NFZ5 429 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 OR10A6Q8NH74 314 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 TRNT1Q96Q11 434 aaKnown RBP14.74□□□□□ -0.05
USB1-215ENST00000569252 SECISBP2Q96T21 854 aaKnown RBP14.74□□□□□ -0.05
USB1-215ENST00000569252 SDF2Q99470 211 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 KAT8Q9H7Z6 458 aaKnown RBP14.74□□□□□ -0.05
USB1-215ENST00000569252 METTL7AQ9H8H3 244 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 TRIM45Q9H8W5 580 aaPredicted RBP14.74□□□□□ -0.05
USB1-215ENST00000569252 HHATLQ9HCP6 504 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 SPAG4Q9NPE6 437 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 SACM1LQ9NTJ5 587 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 CACNA1DQ01668 2161 aa14.74□□□□□ -0.05
USB1-215ENST00000569252 CREBBPQ92793 2442 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 TEP1Q99973 2627 aaKnown RBP14.73□□□□□ -0.05
USB1-215ENST00000569252 H3BNH8 94 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 KLRC4-KLRK1H3BQV0 150 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 SCDO00767 359 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 TSPAN2O60636 221 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 DNAJA2O60884 412 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 SLC25A12O75746 678 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 HOXB9P17482 250 aaPredicted RBP14.73□□□□□ -0.05
USB1-215ENST00000569252 COL8A1P27658 744 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 RBBP4Q09028 425 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 GPR68Q15743 365 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.73□□□□□ -0.05
USB1-215ENST00000569252 TBCELQ5QJ74 424 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 EXOSC6Q5RKV6 272 aaKnown RBP14.73□□□□□ -0.05
USB1-215ENST00000569252 CCNJQ5T5M9 372 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 ZNF468Q5VIY5 522 aaPredicted RBP14.73□□□□□ -0.05
USB1-215ENST00000569252 SLC25A25Q6KCM7 469 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 PGAM4Q8N0Y7 254 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 TEX19Q8NA77 164 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 FAM98AQ8NCA5 519 aaKnown RBP14.73□□□□□ -0.05
USB1-215ENST00000569252 C11orf65Q8NCR3 313 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 FAM110BQ8TC76 370 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 PMM1Q92871 262 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 TBL1XR1Q9BZK7 514 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 SERHL2Q9H4I8 314 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 PIF1Q9H611 641 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 MTHFD2LQ9H903 347 aaPredicted RBP14.73□□□□□ -0.05
USB1-215ENST00000569252 POLE3Q9NRF9 147 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 SDHAF3Q9NRP4 125 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 UBQLN4Q9NRR5 601 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 KLRF1Q9NZS2 232 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 LUZP4Q9P127 313 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 ZNF232Q9UNY5 417 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 WDR45Q9Y484 360 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 KCNE3Q9Y6H6 103 aa14.73□□□□□ -0.05
USB1-215ENST00000569252 NUP214P35658 2090 aaPredicted RBP14.72□□□□□ -0.05
USB1-215ENST00000569252 A0A0G2JPF8 293 aa14.72□□□□□ -0.05
USB1-215ENST00000569252 HNRNPCL2B2RXH8 293 aa14.72□□□□□ -0.05
USB1-215ENST00000569252 HNRNPCL3B7ZW38 293 aa14.72□□□□□ -0.05
USB1-215ENST00000569252 GSTA4O15217 222 aa14.72□□□□□ -0.05
USB1-215ENST00000569252 GYG2O15488 501 aa14.72□□□□□ -0.05
USB1-215ENST00000569252 ZNF354AO60765 605 aaPredicted RBP14.72□□□□□ -0.05
USB1-215ENST00000569252 UGT2B11O75310 529 aa14.72□□□□□ -0.05
USB1-215ENST00000569252 BCHEP06276 602 aa14.72□□□□□ -0.05
USB1-215ENST00000569252 SP1P08047 785 aa14.72□□□□□ -0.05
USB1-215ENST00000569252 HNRNPCL4P0DMR1 293 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms