RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CIDECQ96AQ7 238 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-225ENST00000569245 LRRC58Q96CX6 371 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 HSPBAP1Q96EW2 488 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF597Q96LX8 424 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 HOPXQ9BPY8 73 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-225ENST00000569245 VKORC1Q9BQB6 163 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 GPATCH1Q9BRR8 931 aaKnown RBP13.27□□□□□ -0.29
COMMD4-225ENST00000569245 METTL7AQ9H8H3 244 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 PROK2Q9HC23 129 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 PLSCR2Q9NRY7 297 aa13.27□□□□□ -0.29
COMMD4-225ENST00000569245 TRBV5-3A0A0A0MS03 114 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 A0A1W2PRB8 838 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 FXYD1O00168 92 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 RFXANKO14593 260 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 MAST4O15021 2626 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 GYG2O15488 501 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 PPM1BO75688 479 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 TRAPPC6AO75865 159 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 SNX4O95219 450 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 ABCB1P08183 1280 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-225ENST00000569245 RFPL3SP0C7P2 107 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 NAGAP17050 411 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 HOXB9P17482 250 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-225ENST00000569245 GDF1P27539 372 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 PTPN6P29350 595 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 NUP214P35658 2090 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-225ENST00000569245 MAN2A2P49641 1150 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 ADORA2A-AS1P86434 159 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 SLC25A3Q00325 362 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF787Q6DD87 383 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 NCCRP1Q6ZVX7 275 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-225ENST00000569245 TRILQ7L0X0 811 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 NUP54Q7Z3B4 507 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 ANKRD46Q86W74 232 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 CLECL1Q8IZS7 167 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 OR5M9Q8NGP3 310 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 OR5P2Q8WZ92 322 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 OMA1Q96E52 524 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 ZBED6CLQ96FA7 236 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-225ENST00000569245 SECISBP2Q96T21 854 aaKnown RBP13.26□□□□□ -0.29
COMMD4-225ENST00000569245 INPP5KQ9BT40 448 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 PAIP1Q9H074 479 aaKnown RBP13.26□□□□□ -0.29
COMMD4-225ENST00000569245 TP63Q9H3D4 680 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-225ENST00000569245 TAS2R9Q9NYW1 312 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 SLAMF8Q9P0V8 285 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 ACAD8Q9UKU7 415 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 PCDHGB4Q9UN71 923 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 LIPGQ9Y5X9 500 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 CENPEQ02224 2701 aa13.26□□□□□ -0.29
COMMD4-225ENST00000569245 TRGV5A0A0B4J1U4 118 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 ANKRD33BA6NCL7 494 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 OR14I1A6ND48 311 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 FRG2CA6NGY1 282 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 BCKDKO14874 412 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 SUSD5O60279 629 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 NME6O75414 186 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-225ENST00000569245 REM1O75628 298 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 IGHG3P01860 377 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 ZCCHC18P0CG32 403 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 SOX18P35713 384 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 KRT20P35900 424 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 DCTP40126 519 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 CASP3P42574 277 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 MANFP55145 182 aaKnown RBP13.25□□□□□ -0.29
COMMD4-225ENST00000569245 PSME3P61289 254 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 TOMM20Q15388 145 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 GXYLT1Q4G148 440 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 C6orf10Q5SRN2 563 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 SP5Q6BEB4 398 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF585AQ6P3V2 769 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 TMEM107Q6UX40 140 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 SLC34A3Q8N130 599 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 OR7G2Q8NG99 324 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 ZFP28Q8NHY6 868 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 PSMA8Q8TAA3 256 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 AMDHD1Q96NU7 426 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 PANX1Q96RD7 426 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 CGREF1Q99674 301 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 ANGPTL4Q9BY76 406 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF703Q9H7S9 590 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-225ENST00000569245 NEUROD4Q9HD90 331 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 ALKBH4Q9NXW9 302 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 KLRF1Q9NZS2 232 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 TNFRSF10DQ9UBN6 386 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 GPR55Q9Y2T6 319 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-225ENST00000569245 OR10H1Q9Y4A9 318 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 GMEB1Q9Y692 573 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 MYO7BQ6PIF6 2116 aa13.25□□□□□ -0.29
COMMD4-225ENST00000569245 C15orf38-AP3S2A0A0A6YYH1 394 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 A0A1B0GVC2 190 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 LRRC3CA6NJW4 275 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 AQP7O14520 342 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 ADAM10O14672 748 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 GSC2O15499 205 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 PLOD3O60568 738 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 HCN1O60741 890 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 COQ9O75208 318 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 TRIM3O75382 744 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-225ENST00000569245 DNAJC8O75937 253 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-225ENST00000569245 CPSF4O95639 269 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms