RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 NXT1Q9UKK6 140 aaKnown RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 PTRH2Q9Y3E5 179 aaKnown RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 SDK2Q58EX2 2172 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 SYNDIG1LA6NDD5 238 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 DLGAP1O14490 977 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 DNAJB5O75953 348 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 UMODP07911 640 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 ACADSP16219 412 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 IL7RP16871 459 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 PRKACGP22612 351 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 GPR143P51810 404 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 CDH12P55289 794 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 EIF3IQ13347 325 aaKnown RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 NPTX1Q15818 432 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 C11orf91Q3C1V1 193 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 SHQ1Q6PI26 577 aaKnown RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 DHRS4L2Q6PKH6 230 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 CPEB2Q7Z5Q1 589 aaKnown RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 ZNF605Q86T29 641 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 SVOPLQ8N434 492 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 PACRGLQ8N7B6 248 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 OR6T1Q8NGN1 323 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 SDCCAG3Q96C92 435 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 ZNF347Q96SE7 839 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 PIP5K1AQ99755 562 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 ARHGDIGQ99819 225 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 SMURF2Q9HAU4 748 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 ZNF223Q9UK11 482 aaPredicted RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 CFL2Q9Y281 166 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 LYVE1Q9Y5Y7 322 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 CDC14CA4D256 554 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 FFAR1O14842 300 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 KLF7O75840 302 aaPredicted RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 ATP6V1C1P21283 382 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 CALRP27797 417 aaKnown RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 PPICP45877 212 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 EEF1A1P68104 462 aaKnown RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 FOXD4Q12950 439 aaPredicted RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 DAG1Q14118 895 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 C6orf52Q5T4I8 152 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 TCTN3Q6NUS6 607 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 TSPYL5Q86VY4 417 aaPredicted RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 NFAM1Q8NET5 270 aaPredicted RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 OR52J3Q8NH60 311 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 WDR36Q8NI36 951 aaKnown RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 WWTR1Q9GZV5 400 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 CACYBPQ9HB71 228 aaKnown RBP16.36■□□□□ 0.21
HERC2-208ENST00000566635 SLC9A8Q9Y2E8 581 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 IFT52Q9Y366 437 aa16.36■□□□□ 0.21
HERC2-208ENST00000566635 C2orf92A0A1B0GVN3 265 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 TTC36A6NLP5 189 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 SYT5O00445 386 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 ADAMDEC1O15204 470 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 SOX30O94993 753 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 DBIP07108 87 aaKnown RBP16.35■□□□□ 0.21
HERC2-208ENST00000566635 RHCEP18577 417 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 FPR1P21462 350 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 DNAJA1P31689 397 aaKnown RBP16.35■□□□□ 0.21
HERC2-208ENST00000566635 C6orf15Q6UXA7 325 aaPredicted RBP16.35■□□□□ 0.21
HERC2-208ENST00000566635 PRR22Q8IZ63 422 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 APCDD1LQ8NCL9 501 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 B3GNT7Q8NFL0 401 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 EFHD2Q96C19 240 aaPredicted RBP16.35■□□□□ 0.21
HERC2-208ENST00000566635 LCORQ96JN0 433 aaPredicted RBP16.35■□□□□ 0.21
HERC2-208ENST00000566635 PRR14Q9BWN1 585 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 TRIM45Q9H8W5 580 aaPredicted RBP16.35■□□□□ 0.21
HERC2-208ENST00000566635 POLE3Q9NRF9 147 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 SLC13A4Q9UKG4 626 aa16.35■□□□□ 0.21
HERC2-208ENST00000566635 FAM32AQ9Y421 112 aaKnown RBP16.35■□□□□ 0.21
HERC2-208ENST00000566635 RIF1Q5UIP0 2472 aaKnown RBP16.35■□□□□ 0.21
HERC2-208ENST00000566635 FRG2CA6NGY1 282 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 PROB1E7EW31 1015 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 DPM1O60762 260 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 THBS1P07996 1170 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 ALDH3A2P51648 485 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 LIMK1P53667 647 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 PPP2R2BQ00005 443 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 HOXC5Q00444 222 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 PLAURQ03405 335 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 TARDBPQ13148 414 aaKnown RBP eCLIP16.34■□□□□ 0.21
HERC2-208ENST00000566635 LARS2Q15031 903 aaKnown RBP16.34■□□□□ 0.21
HERC2-208ENST00000566635 LIN52Q52LA3 116 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 PDZK1Q5T2W1 519 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 SLC29A4Q7RTT9 530 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 HIPK1Q86Z02 1210 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 ZNF614Q8N883 585 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 NAF1Q96HR8 494 aaKnown RBP16.34■□□□□ 0.21
HERC2-208ENST00000566635 EPYCQ99645 322 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 LIN28AQ9H9Z2 209 aaKnown RBP16.34■□□□□ 0.21
HERC2-208ENST00000566635 CTPS2Q9NRF8 586 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 C19orf25Q9UFG5 118 aaPredicted RBP16.34■□□□□ 0.21
HERC2-208ENST00000566635 PCDHGA3Q9Y5H0 932 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 AP4B1Q9Y6B7 739 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 TNFRSF11BO00300 401 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 BCAS1O75363 584 aaPredicted RBP16.34■□□□□ 0.21
HERC2-208ENST00000566635 ALPLP05186 524 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 NID1P14543 1247 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 UQCRBP14927 111 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 PAX7P23759 505 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 EXOC3L2Q2M3D2 409 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms