RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 PTGFRNQ9P2B2 879 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 TBX21Q9UL17 535 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 ENTPD4Q9Y227 616 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 GPR52Q9Y2T5 361 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 LOC102723532A0A0G2JNH3 316 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 ANKRD61A6NGH8 418 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 SOX1O00570 391 aaPredicted RBP20.21■□□□□ 0.83
SPSB3-208ENST00000566339 AGR2O95994 175 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 AHCYP23526 432 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 SOX18P35713 384 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 SSR2P43308 183 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 PITPNBP48739 271 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 SLC9A5Q14940 896 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 ZIC1Q15915 447 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 COL28A1Q2UY09 1125 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 KIAA1161Q6NSJ0 714 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 FAM180BQ6P0A1 224 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 SMARCD3Q6STE5 483 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 GPALPP1Q8IXQ4 340 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 ACBD7Q8N6N7 88 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 KREMEN2Q8NCW0 462 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 BRIX1Q8TDN6 353 aaKnown RBP20.21■□□□□ 0.83
SPSB3-208ENST00000566339 RADILQ96JH8 1075 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 THAP7Q9BT49 309 aaPredicted RBP20.21■□□□□ 0.83
SPSB3-208ENST00000566339 MENTQ9BUN1 341 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 DPAGT1Q9H3H5 408 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 OSGEPL1Q9H4B0 414 aa20.21■□□□□ 0.83
SPSB3-208ENST00000566339 CUEDC1Q9NWM3 386 aaPredicted RBP20.21■□□□□ 0.83
SPSB3-208ENST00000566339 A0A1B0GVI7 797 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 ABHD14A-ACY1A0A1B0GW23 586 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 SHISA3A0PJX4 238 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 KPNA3O00505 521 aaPredicted RBP20.2■□□□□ 0.82
SPSB3-208ENST00000566339 CHP2O43745 196 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 LZTS3O60299 673 aaPredicted RBP20.2■□□□□ 0.82
SPSB3-208ENST00000566339 ICMTO60725 284 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 SNAPC5O75971 98 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 ADH1AP07327 375 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 C6P13671 934 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 NDUFV2P19404 249 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 STOMP27105 288 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 CSTF1Q05048 431 aaKnown RBP20.2■□□□□ 0.82
SPSB3-208ENST00000566339 CEBPEQ15744 281 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 MRM1Q6IN84 353 aaKnown RBP20.2■□□□□ 0.82
SPSB3-208ENST00000566339 IDO2Q6ZQW0 420 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 ERN2Q76MJ5 926 aaKnown RBP20.2■□□□□ 0.82
SPSB3-208ENST00000566339 ADCK2Q7Z695 626 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 OR4F15Q8NGB8 312 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 HGDQ93099 445 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 WACQ9BTA9 647 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 SLC38A1Q9H2H9 487 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 GALNT9Q9HCQ5 603 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 TRIM36Q9NQ86 728 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 SEMA4GQ9NTN9 838 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 C5AR2Q9P296 337 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 MALT1Q9UDY8 824 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 TEKT2Q9UIF3 430 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 CACNG2Q9Y698 323 aa20.2■□□□□ 0.82
SPSB3-208ENST00000566339 COL4A3Q01955 1670 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 A0A1W2PPV9 198 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 A0A1W2PQ72 361 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 CD79BP40259 229 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 CTBP2P56545 445 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 CSNK1G2P78368 415 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 DEFB103AP81534 67 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 TGM3Q08188 693 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 RPL13AP3Q6NVV1 102 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 ANKRD54Q6NXT1 300 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 WASH2PQ6VEQ5 465 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 ZFP41Q8N8Y5 198 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 LMNTD1Q8N9Z9 388 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 TP53I13Q8NBR0 393 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-208ENST00000566339 FAM46AQ96IP4 442 aaKnown RBP20.19■□□□□ 0.82
SPSB3-208ENST00000566339 MFRPQ9BY79 579 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 GHITMQ9H3K2 345 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 WDR70Q9NW82 654 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 SLC27A6Q9Y2P4 619 aa20.19■□□□□ 0.82
SPSB3-208ENST00000566339 LRIT2A6NDA9 550 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 GPR89AB7ZAQ6 455 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 B8ZZF3 427 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 OR1F1O43749 312 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 ITGA10O75578 1167 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 APOL3O95236 402 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 HMGN2P05204 90 aaKnown RBP20.18■□□□□ 0.82
SPSB3-208ENST00000566339 CISD3P0C7P0 127 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 GPR89BP0CG08 455 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 ALPPL2P10696 532 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 ANXA3P12429 323 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 GNSP15586 552 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 CSNK2A2P19784 350 aaPredicted RBP20.18■□□□□ 0.82
SPSB3-208ENST00000566339 PAICSP22234 425 aaKnown RBP20.18■□□□□ 0.82
SPSB3-208ENST00000566339 ATP6V1E1P36543 226 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 PER3P56645 1201 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 METRNLQ641Q3 311 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 RFPL4BQ6ZWI9 263 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 SZRD1Q7Z422 152 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 LRRTM4Q86VH4 590 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 GLCCI1Q86VQ1 547 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 SRFBP1Q8NEF9 429 aaKnown RBP20.18■□□□□ 0.82
SPSB3-208ENST00000566339 OR8D1Q8WZ84 308 aa20.18■□□□□ 0.82
SPSB3-208ENST00000566339 ACAT2Q9BWD1 397 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms